RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TRPV2Q9Y5S1 764 aa19.37■□□□□ 0.69
CCDC9-202ENST00000595659 IGKV6D-21A0A0A0MT36 114 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 ESYT2A0FGR8 921 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 CYP3A4P08684 503 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 KLRC1P26715 233 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 PDXDC2PQ6P474 469 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 FIBCD1Q8N539 461 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 CCDC12Q8WUD4 166 aaPredicted RBP19.36■□□□□ 0.69
CCDC9-202ENST00000595659 CRYGNQ8WXF5 182 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 TNPO1Q92973 898 aaKnown RBP19.36■□□□□ 0.69
CCDC9-202ENST00000595659 AGXT2Q9BYV1 514 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 ZNF302Q9NR11 478 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 VPS54Q9P1Q0 977 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 GINS2Q9Y248 185 aa19.36■□□□□ 0.69
CCDC9-202ENST00000595659 M0QZ92 97 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 TMEM266Q2M3C6 531 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 PRR16Q569H4 304 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 FAM160B1Q5W0V3 765 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 MIS18BP1Q6P0N0 1132 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 RTN4RL1Q86UN2 441 aaPredicted RBP19.35■□□□□ 0.69
CCDC9-202ENST00000595659 CKAP2LQ8IYA6 745 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 FBXL16Q8N461 479 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 ATP8B4Q8TF62 1192 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 MRPL38Q96DV4 380 aaKnown RBP19.35■□□□□ 0.69
CCDC9-202ENST00000595659 SAMD11Q96NU1 681 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 PPP1R16BQ96T49 567 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 CELF4Q9BZC1 486 aaKnown RBP19.35■□□□□ 0.69
CCDC9-202ENST00000595659 PADI3Q9ULW8 664 aa19.35■□□□□ 0.69
CCDC9-202ENST00000595659 TTC28Q96AY4 2481 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 COL4A4P53420 1690 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-202ENST00000595659 SMIM35A0A1B0GVV1 85 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 H3BNC9 293 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 HBP1O60381 514 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 CSPG5O95196 566 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 ATP4AP20648 1035 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 GNA11P29992 359 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 CTNNB1P35222 781 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 TOB2Q14106 344 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-202ENST00000595659 PTPROQ16827 1216 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 RUFY3Q7L099 469 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 UBE2ZQ9H832 354 aaPredicted RBP19.34■□□□□ 0.69
CCDC9-202ENST00000595659 CDHR5Q9HBB8 845 aa19.34■□□□□ 0.69
CCDC9-202ENST00000595659 MUC3AQ02505 3323 aa19.33■□□□□ 0.69
CCDC9-202ENST00000595659 NID2Q14112 1375 aa19.33■□□□□ 0.69
CCDC9-202ENST00000595659 IFNAR1P17181 557 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 KCNA5P22460 613 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 SLC26A2P50443 739 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 KRT76Q01546 638 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 PAK2Q13177 524 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 BTG3Q14201 252 aaPredicted RBP19.33■□□□□ 0.68
CCDC9-202ENST00000595659 BANK1Q8NDB2 785 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.68
CCDC9-202ENST00000595659 UPF3BQ9BZI7 483 aaKnown RBP19.33■□□□□ 0.68
CCDC9-202ENST00000595659 ZSWIM6Q9HCJ5 1215 aa19.33■□□□□ 0.68
CCDC9-202ENST00000595659 ADGRA3Q8IWK6 1321 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 EDIL3O43854 480 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 BMPR1AP36894 532 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 NLRP5P59047 1200 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 NFX1Q12986 1120 aaKnown RBP19.32■□□□□ 0.68
CCDC9-202ENST00000595659 STK3Q13188 491 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 TCEAL5Q5H9L2 206 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 EP400NLQ6ZTU2 488 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 KIAA0319LQ8IZA0 1049 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 TMX1Q9H3N1 280 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 TBC1D22BQ9NU19 505 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 CYP46A1Q9Y6A2 500 aa19.32■□□□□ 0.68
CCDC9-202ENST00000595659 IGSF9BQ9UPX0 1349 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 ZBTB42B2RXF5 422 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 RPLP2P05387 115 aaKnown RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 LINC00271P0C7V0 271 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 EVCP57679 992 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 SETQ01105 290 aaPredicted RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 PAN2Q504Q3 1202 aaKnown RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 ZNF484Q5JVG2 852 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 MCTP2Q6DN12 878 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 NME8Q8N427 588 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 METTL13Q8N6R0 699 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 CCDC148Q8NFR7 591 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 BICD2Q8TD16 824 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 GJA10Q969M2 543 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 LENG9Q96B70 501 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 ZNF689Q96CS4 500 aaPredicted RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 RC3H2Q9HBD1 1191 aaKnown RBP19.31■□□□□ 0.68
CCDC9-202ENST00000595659 GABBR1Q9UBS5 961 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 SAMM50Q9Y512 469 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 SQORQ9Y6N5 450 aa19.31■□□□□ 0.68
CCDC9-202ENST00000595659 MICAL3Q7RTP6 2002 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 GRM6O15303 877 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 DTNBO60941 627 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 DGKIO75912 1065 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 PSAPP07602 524 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 CIITAP33076 1130 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 GATMP50440 423 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
CCDC9-202ENST00000595659 ZNF746Q6NUN9 644 aaPredicted RBP19.3■□□□□ 0.68
CCDC9-202ENST00000595659 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.3■□□□□ 0.68
CCDC9-202ENST00000595659 FTHL17Q9BXU8 183 aa19.3■□□□□ 0.68
CCDC9-202ENST00000595659 RAPGEFL1Q9UHV5 662 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms