RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GNAT1P11488 350 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 MYCLP12524 364 aaPredicted RBP14.68□□□□□ -0.06
SCAF1-202ENST00000595242 SP2Q02086 613 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 MTMR3Q13615 1198 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 CDC37Q16543 378 aaPredicted RBP14.68□□□□□ -0.06
SCAF1-202ENST00000595242 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
SCAF1-202ENST00000595242 RRP12Q5JTH9 1297 aaKnown RBP14.68□□□□□ -0.06
SCAF1-202ENST00000595242 DGLUCYQ7Z3D6 616 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 CCDC83Q8IWF9 413 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 UBALD2Q8IYN6 164 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 CMTR2Q8IYT2 770 aaKnown RBP14.68□□□□□ -0.06
SCAF1-202ENST00000595242 VN1R2Q8NFZ6 395 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 MICAL1Q8TDZ2 1067 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 ATP8B4Q8TF62 1192 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 RMDN1Q96DB5 314 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 UBA5Q9GZZ9 404 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 MLXIPQ9HAP2 919 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 TCP11L1Q9NUJ3 509 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 ANAPC4Q9UJX5 808 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 SMC3Q9UQE7 1217 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 CEP250Q9BV73 2442 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 MYH15Q9Y2K3 1946 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 PPFIA3O75145 1194 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 FGAP02671 866 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 UBA1P22314 1058 aaKnown RBP14.67□□□□□ -0.06
SCAF1-202ENST00000595242 EVCP57679 992 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
SCAF1-202ENST00000595242 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
SCAF1-202ENST00000595242 SORCS3Q9UPU3 1222 aa14.67□□□□□ -0.06
SCAF1-202ENST00000595242 CFBP00751 764 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 TGFB3P10600 412 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 LPIN1Q14693 890 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 KLHL40Q2TBA0 621 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
SCAF1-202ENST00000595242 Q6ZUG5 572 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 S1PR5Q9H228 398 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 LMBRD1Q9NUN5 540 aa14.66□□□□□ -0.06
SCAF1-202ENST00000595242 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
SCAF1-202ENST00000595242 ACACBO00763 2458 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 FSD2A1L4K1 749 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 NOP56O00567 594 aaKnown RBP14.65□□□□□ -0.06
SCAF1-202ENST00000595242 STX6O43752 255 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 ZSCAN22P10073 491 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-202ENST00000595242 SYT1P21579 422 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 GJB2P29033 226 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 CLCN5P51795 746 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 ADAM17P78536 824 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 ARHGAP4P98171 946 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 DUSP6Q16828 381 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 MB21D2Q8IYB1 491 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-202ENST00000595242 CRIPAKQ8N1N5 446 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 LMBR1Q8WVP7 490 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
SCAF1-202ENST00000595242 TCEANC2Q96MN5 208 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 CDCA3Q99618 268 aaPredicted RBP14.65□□□□□ -0.06
SCAF1-202ENST00000595242 PDCD2LQ9BRP1 358 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 MFSD1Q9H3U5 465 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 SMOC2Q9H3U7 446 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 BCAS3Q9H6U6 928 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 NR2E1Q9Y466 385 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 FANCMQ8IYD8 2048 aa14.65□□□□□ -0.06
SCAF1-202ENST00000595242 TCHHQ07283 1943 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 PFKFB2O60825 505 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 SRGAP2BP0DMP2 458 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 TECP42680 631 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 MCTP1Q6DN14 999 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 ANKRD54Q6NXT1 300 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 TMEM184AQ6ZMB5 413 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 VSIG10LQ86VR7 867 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 ADGRF4Q8IZF3 695 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 TMEM87AQ8NBN3 555 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 ZFP91Q96JP5 570 aaPredicted RBP14.64□□□□□ -0.07
SCAF1-202ENST00000595242 CNTNAP3BQ96NU0 1288 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 LARP6Q9BRS8 491 aaKnown RBP14.64□□□□□ -0.07
SCAF1-202ENST00000595242 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
SCAF1-202ENST00000595242 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
SCAF1-202ENST00000595242 BAZ2BQ9UIF8 2168 aaKnown RBP14.63□□□□□ -0.07
SCAF1-202ENST00000595242 ZNF213O14771 459 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 PDCP20941 246 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 HSD17B4P51659 736 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 UBE3AQ05086 875 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 MGAT3Q09327 533 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 PGM5Q15124 567 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 SYCE2Q6PIF2 218 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 RTN4RL1Q86UN2 441 aaPredicted RBP14.63□□□□□ -0.07
SCAF1-202ENST00000595242 NECAB1Q8N987 351 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 NCOA7Q8NI08 942 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 SMARCC2Q8TAQ2 1214 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 LINC01599Q8WXQ3 324 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
SCAF1-202ENST00000595242 MTMR6Q9Y217 621 aa14.63□□□□□ -0.07
SCAF1-202ENST00000595242 SPTBN2O15020 2390 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 F13A1P00488 732 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 ERVFC1P60507 584 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 KCNC3Q14003 757 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 PUM1Q14671 1186 aaKnown RBP eCLIP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms