RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 TXNRD1Q16881 649 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PABPC1LQ4VXU2 614 aaKnown RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PNMA8AQ86V59 439 aaPredicted RBP4.78□□□□□ -1.64
LRIT3-202ENST00000594814 SPICE1Q8N0Z3 855 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC63Q8NA47 563 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 PARD3BQ8TEW8 1205 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 MAIP1Q8WWC4 291 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 SLF1Q9BQI6 1058 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 NUP58Q9BVL2 599 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 TIPINQ9BVW5 301 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 LMCD1Q9NZU5 365 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 CEP131Q9UPN4 1083 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 ZNF652Q9Y2D9 606 aa4.78□□□□□ -1.64
LRIT3-202ENST00000594814 C4BP0C0L5 1744 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 DDX60Q8IY21 1712 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 CICQ96RK0 1608 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 COL15A1P39059 1388 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 A0A1W2PQC6 194 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 CCT8L1PA6NM43 557 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 RNF113AO15541 343 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PPP1R12BO60237 982 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 SMIM24O75264 130 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 AP1G2O75843 785 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 FMNL1O95466 1100 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 NTSR2O95665 410 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 STARD3NLO95772 234 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 APBA3O96018 575 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ATP6V1C1P21283 382 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 NOS2P35228 1153 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PPP1R2P41236 205 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 EXOSC10Q01780 885 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ST3GAL1Q11201 340 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ITGA9Q13797 1035 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PPP2R5EQ16537 467 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 RABL6Q3YEC7 729 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF569Q5MCW4 686 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 RNF187Q5TA31 235 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 CREB3L3Q68CJ9 461 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF365Q70YC5 407 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 FAM228AQ86W67 206 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 COL23A1Q86Y22 540 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 IQCKQ8N0W5 287 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 FBF1Q8TES7 1133 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 FRMD6Q96NE9 622 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 NR1H4Q96RI1 486 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 YIPF2Q9BWQ6 316 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TAF1DQ9H5J8 278 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 C9orf78Q9NZ63 289 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TBC1D7Q9P0N9 293 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TPCN1Q9ULQ1 816 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PAIP2BQ9ULR5 123 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TACC3Q9Y6A5 838 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 C4AP0C0L4 1744 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PHF20L1A8MW92 1017 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ORC4O43929 436 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 EVI5O60447 810 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 FOXD2O60548 495 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 DTNBO60941 627 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ANP32DO95626 131 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ECEL1O95672 775 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 MMEP08473 750 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TM4SF1P30408 202 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 HSPA9P38646 679 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 SEC13P55735 322 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TIMM10P62072 90 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ARMC3Q5W041 872 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TATDN1Q6P1N9 297 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 LINC00301Q8NCQ3 95 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 SLAIN1Q8ND83 568 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TTLL11Q8NHH1 800 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 GIPC2Q8TF65 315 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 NOC3LQ8WTT2 800 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 RRP36Q96EU6 259 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 UROC1Q96N76 676 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TMEM237Q96Q45 408 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 CCDC8Q9H0W5 538 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 HSD3B7Q9H2F3 369 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 MMADHCQ9H3L0 296 aaPredicted RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 UNC45AQ9H3U1 944 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 HAUS2Q9NVX0 235 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 PPARGC1AQ9UBK2 798 aaKnown RBP4.77□□□□□ -1.65
LRIT3-202ENST00000594814 TMCC3Q9ULS5 477 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF510Q9Y2H8 683 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 ZMYM6O95789 1325 aa4.77□□□□□ -1.65
LRIT3-202ENST00000594814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TMEM221A6NGB7 291 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 LSM1O15116 133 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 USO1O60763 962 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SURF6O75683 361 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 KLRK1P26718 216 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 PLCD1P51178 756 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NUBP1P53384 320 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 KLC1Q07866 573 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TFCP2Q12800 502 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ITGB3BPQ13352 177 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms