RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 CA8P35219 290 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 SLC1A4P43007 532 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 IRGCQ6NXR0 463 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 DYMQ7RTS9 669 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 ELOA2Q8IYF1 753 aaPredicted RBP13.29□□□□□ -0.28
LIG1-207ENST00000594759 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
LIG1-207ENST00000594759 Q9H521 79 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 CASQ2O14958 399 aaPredicted RBP13.29□□□□□ -0.28
LIG1-207ENST00000594759 ACSL3O95573 720 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 FGGP02679 453 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 CDKAL1Q5VV42 579 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 LZICQ8WZA0 190 aa13.29□□□□□ -0.28
LIG1-207ENST00000594759 DMAP1Q9NPF5 467 aaPredicted RBP13.29□□□□□ -0.28
LIG1-207ENST00000594759 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ATP9AO75110 1047 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 GNAT2P19087 354 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ABCB4P21439 1286 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ZNF844Q08AG5 666 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DNAJC7Q99615 494 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 TUBB6Q9BUF5 446 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
LIG1-207ENST00000594759 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ATXN10Q9UBB4 475 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ZFP69BQ9UJL9 534 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 PPP1R3GB7ZBB8 358 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 SNAP23O00161 211 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 SPOPO43791 374 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 SERPING1P05155 500 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 PYGBP11216 843 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DRD4P21917 467 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 POLD1P28340 1107 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
LIG1-207ENST00000594759 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
LIG1-207ENST00000594759 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DCAF17Q5H9S7 520 aaPredicted RBP13.28□□□□□ -0.28
LIG1-207ENST00000594759 STK32AQ8WU08 396 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.282e-7■■■■□ 20.8
LIG1-207ENST00000594759 SIKE1Q9BRV8 207 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 RNPEPL1Q9HAU8 725 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 PTPN22Q9Y2R2 807 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 TSC22D4Q9Y3Q8 395 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
LIG1-207ENST00000594759 CDC42BPGQ6DT37 1551 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 TTI1O43156 1089 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 NOL3O60936 208 aaKnown RBP13.27□□□□□ -0.28
LIG1-207ENST00000594759 MARK3P27448 753 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 SERPINB6P35237 376 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 AKNAD1Q5T1N1 836 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 RFX8Q6ZV50 586 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 CCDC80Q76M96 950 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 TRAPPC9Q96Q05 1148 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 TMEM60Q9H2L4 133 aa13.27□□□□□ -0.28
LIG1-207ENST00000594759 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.28
LIG1-207ENST00000594759 SRGNP10124 158 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 ATP6V1C1P21283 382 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 PEX5P50542 639 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 ERFP50548 548 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
LIG1-207ENST00000594759 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 SLITRK6Q9H5Y7 841 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 IMPDH2P12268 514 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 GUCY1A2P33402 732 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 TMED10P49755 219 aaKnown RBP13.27□□□□□ -0.29
LIG1-207ENST00000594759 SIK1P57059 783 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
LIG1-207ENST00000594759 SRRM1Q8IYB3 904 aaKnown RBP13.27□□□□□ -0.29
LIG1-207ENST00000594759 CCDC110Q8TBZ0 833 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
LIG1-207ENST00000594759 PLEKP08567 350 aaPredicted RBP13.26□□□□□ -0.29
LIG1-207ENST00000594759 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 MAGEA8P43361 318 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 DPYDQ12882 1025 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 RCN1Q15293 331 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 PIP4K2CQ8TBX8 421 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 FAM192AQ9GZU8 254 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 NOC2LQ9Y3T9 749 aaKnown RBP13.26□□□□□ -0.29
LIG1-207ENST00000594759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
LIG1-207ENST00000594759 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
LIG1-207ENST00000594759 ABLIM1O14639 778 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms