RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
CAPN12-202ENST00000593700 MCM6Q14566 821 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 L1TD1Q5T7N2 865 aaKnown RBP16.34■□□□□ 0.21
CAPN12-202ENST00000593700 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 GRAMD1CQ8IYS0 662 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 USP6NLQ92738 828 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 HSD17B14Q9BPX1 270 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 BLOC1S4Q9NUP1 217 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
CAPN12-202ENST00000593700 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 EYA4O95677 639 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 GGPS1O95749 300 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 RPN1P04843 607 aaKnown RBP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 KRT18P05783 430 aaKnown RBP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 PLA2G4BP0C869 781 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 SPATA31C1P0DKV0 1188 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 DSG2Q14126 1118 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
CAPN12-202ENST00000593700 KCNB1Q14721 858 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 OLFML2BQ68BL8 750 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 GPIHBP1Q8IV16 184 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 BANK1Q8NDB2 785 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 TMC2Q8TDI7 906 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 ARMC5Q96C12 935 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 C7orf25Q9BPX7 421 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 TRIM9Q9C026 710 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 EXOC1Q9NV70 894 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 KCND2Q9NZV8 630 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 KAT6AQ92794 2004 aa16.33■□□□□ 0.2
CAPN12-202ENST00000593700 E9PMD0 336 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 BIN1O00499 593 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 BACH1O14867 736 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 FARP2O94887 1054 aaPredicted RBP16.32■□□□□ 0.2
CAPN12-202ENST00000593700 SLITRK3O94933 977 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 LYPLA2O95372 231 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 HMGCRP04035 888 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
CAPN12-202ENST00000593700 PPP1R2P41236 205 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 ACTR2P61160 394 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 ANO6Q4KMQ2 910 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 CNNM4Q6P4Q7 775 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 CYFIP1Q7L576 1253 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
CAPN12-202ENST00000593700 C4orf19Q8IY42 314 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 SPATA20Q8TB22 786 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 STAMQ92783 540 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
CAPN12-202ENST00000593700 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 RGL1Q9NZL6 768 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
CAPN12-202ENST00000593700 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
CAPN12-202ENST00000593700 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 PVALEFA0A1B0GWK0 134 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 ARHGEF35A5YM69 484 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 CCNE2O96020 404 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 GH1P01241 217 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 SARSP49591 514 aaKnown RBP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 MRE11P49959 708 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 CAP1Q01518 475 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 SP4Q02446 784 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 STIM1Q13586 685 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 CUL4BQ13620 913 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 ECM1Q16610 540 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 MFSD14CQ5VZR4 134 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 UNC13DQ70J99 1090 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 CCDC65Q8IXS2 484 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 SYT2Q8N9I0 419 aaPredicted RBP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 MLKLQ8NB16 471 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 NPLOC4Q8TAT6 608 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 BHMT2Q9H2M3 363 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
CAPN12-202ENST00000593700 DBR1Q9UK59 544 aaKnown RBP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
CAPN12-202ENST00000593700 RBM47A0AV96 593 aaKnown RBP16.3■□□□□ 0.2
CAPN12-202ENST00000593700 TBCAO75347 108 aaKnown RBP16.3■□□□□ 0.2
CAPN12-202ENST00000593700 CYP2B6P20813 491 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 ZNF165P49910 485 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 TPM4P67936 248 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 MORC3Q14149 939 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 CELF3Q5SZQ8 465 aaKnown RBP16.3■□□□□ 0.2
CAPN12-202ENST00000593700 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 SEPT1Q8WYJ6 367 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 ANP32BQ92688 251 aaKnown RBP16.3■□□□□ 0.2
CAPN12-202ENST00000593700 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
CAPN12-202ENST00000593700 GABBR1Q9UBS5 961 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms