RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 AGO3Q9H9G7 860 aaKnown RBP20.4■□□□□ 0.86
CIRBP-243ENST00000593128 PCDHA2Q9Y5H9 948 aa20.4■□□□□ 0.86
CIRBP-243ENST00000593128 ADGRA3Q8IWK6 1321 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 H3BNC9 293 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 RPS6KB1P23443 525 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 PAK2Q13177 524 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 BTG3Q14201 252 aaPredicted RBP20.39■□□□□ 0.85
CIRBP-243ENST00000593128 PDXDC2PQ6P474 469 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 MTHFD1LQ6UB35 978 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 REXO1Q8N1G1 1221 aaKnown RBP20.39■□□□□ 0.85
CIRBP-243ENST00000593128 BANK1Q8NDB2 785 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 RASGRP4Q8TDF6 673 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 PPP1R16BQ96T49 567 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 ZNF302Q9NR11 478 aa20.39■□□□□ 0.85
CIRBP-243ENST00000593128 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
CIRBP-243ENST00000593128 RPLP2P05387 115 aaKnown RBP20.38■□□□□ 0.85
CIRBP-243ENST00000593128 COL9A1P20849 921 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 KLRC1P26715 233 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 CCT2P78371 535 aaKnown RBP20.38■□□□□ 0.85
CIRBP-243ENST00000593128 TMEM266Q2M3C6 531 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 TIGD5Q53EQ6 642 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 SWSAP1Q6NVH7 229 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 MIS18BP1Q6P0N0 1132 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 NIPA1Q7RTP0 329 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 TEX2Q8IWB9 1127 aa20.38■□□□□ 0.85
CIRBP-243ENST00000593128 CELF4Q9BZC1 486 aaKnown RBP20.38■□□□□ 0.85
CIRBP-243ENST00000593128 PRPF3O43395 683 aaKnown RBP20.37■□□□□ 0.85
CIRBP-243ENST00000593128 REC8O95072 547 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 PSMA5P28066 241 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 KRT76Q01546 638 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 NFX1Q12986 1120 aaKnown RBP20.37■□□□□ 0.85
CIRBP-243ENST00000593128 PAN2Q504Q3 1202 aaKnown RBP20.37■□□□□ 0.85
CIRBP-243ENST00000593128 PRR16Q569H4 304 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 TCEAL5Q5H9L2 206 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 ABHD15Q6UXT9 468 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 CCDC60Q8IWA6 550 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-243ENST00000593128 LINC01599Q8WXQ3 324 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 KCNB2Q92953 911 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 ZMYND12Q9H0C1 365 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 NCOA5Q9HCD5 579 aaKnown RBP20.37■□□□□ 0.85
CIRBP-243ENST00000593128 PADI3Q9ULW8 664 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
CIRBP-243ENST00000593128 COL4A6Q14031 1691 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 HBP1O60381 514 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 ATG7O95352 703 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 GNA11P29992 359 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 SLC26A2P50443 739 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 PKN1Q16512 942 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 ATP8B4Q8TF62 1192 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 VPS54Q9P1Q0 977 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 RAPGEFL1Q9UHV5 662 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 LRFN2Q9ULH4 789 aa20.36■□□□□ 0.85
CIRBP-243ENST00000593128 IGLV3-22A0A075B6J6 115 aa20.35■□□□□ 0.85
CIRBP-243ENST00000593128 SMIM35A0A1B0GVV1 85 aa20.35■□□□□ 0.85
CIRBP-243ENST00000593128 ESYT2A0FGR8 921 aa20.35■□□□□ 0.85
CIRBP-243ENST00000593128 H3BQ06 376 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-243ENST00000593128 SETQ01105 290 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-243ENST00000593128 C11orf84Q9BUA3 381 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-243ENST00000593128 FTHL17Q9BXU8 183 aa20.35■□□□□ 0.85
CIRBP-243ENST00000593128 NSUN3Q9H649 340 aaKnown RBP20.35■□□□□ 0.85
CIRBP-243ENST00000593128 MYH9P35579 1960 aaKnown RBP20.35■□□□□ 0.85
CIRBP-243ENST00000593128 EVPLQ92817 2033 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 IGKV6D-21A0A0A0MT36 114 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-243ENST00000593128 GRM6O15303 877 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 CYP3A4P08684 503 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 BMPR1AP36894 532 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 PTCRAQ6ISU1 281 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-243ENST00000593128 RTN4RL1Q86UN2 441 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-243ENST00000593128 NME8Q8N427 588 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 METTL13Q8N6R0 699 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 CCDC148Q8NFR7 591 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 BICD2Q8TD16 824 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 LARP6Q9BRS8 491 aaKnown RBP20.34■□□□□ 0.85
CIRBP-243ENST00000593128 TBC1D22BQ9NU19 505 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 RWDD3Q9Y3V2 267 aa20.34■□□□□ 0.85
CIRBP-243ENST00000593128 ATG2AQ2TAZ0 1938 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 TTC3P53804 2025 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 KIAA1671Q9BY89 1806 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 DHX15O43143 795 aaKnown RBP20.33■□□□□ 0.85
CIRBP-243ENST00000593128 DGKIO75912 1065 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 PSAPP07602 524 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 STAG3L1P0CL83 205 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 NLRP5P59047 1200 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 LEXMQ3ZCV2 418 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 NPAS4Q8IUM7 802 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.33■□□□□ 0.85
CIRBP-243ENST00000593128 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.85
CIRBP-243ENST00000593128 CLDND1Q9NY35 253 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 GABBR1Q9UBS5 961 aa20.33■□□□□ 0.85
CIRBP-243ENST00000593128 MRPL42Q9Y6G3 142 aaKnown RBP20.33■□□□□ 0.85
CIRBP-243ENST00000593128 NID2Q14112 1375 aa20.33■□□□□ 0.84
CIRBP-243ENST00000593128 RPS6KA5O75582 802 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 RB1P06400 928 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 IL9P15248 144 aa20.32■□□□□ 0.84
CIRBP-243ENST00000593128 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
CIRBP-243ENST00000593128 SSTR3P32745 418 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms