RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ANKRD1Q15327 319 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
APOC1-208ENST00000592535 PDXDC2PQ6P474 469 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 MYOCDQ8IZQ8 938 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 ATP8B4Q8TF62 1192 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 ARNTL2Q8WYA1 636 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 IFIH1Q9BYX4 1025 aaKnown RBP15.73■□□□□ 0.11
APOC1-208ENST00000592535 C22orf23Q9BZE7 217 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 PCDHA2Q9Y5H9 948 aa15.73■□□□□ 0.11
APOC1-208ENST00000592535 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.72■□□□□ 0.11
APOC1-208ENST00000592535 HBP1O60381 514 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 TDP2O95551 362 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 ATP4AP20648 1035 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 LPIN1Q14693 890 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 FBXO47Q5MNV8 452 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 GALNT17Q6IS24 598 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 MTHFD1LQ6UB35 978 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 SMAP1Q8IYB5 467 aaPredicted RBP15.72■□□□□ 0.11
APOC1-208ENST00000592535 FAM177A1Q8N128 213 aaPredicted RBP15.72■□□□□ 0.11
APOC1-208ENST00000592535 NECAB1Q8N987 351 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 APBB2Q92870 758 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 RAD9AQ99638 391 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 GJB4Q9NTQ9 266 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 TCEAL9Q9UHQ7 104 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 CHD7Q9P2D1 2997 aa15.72■□□□□ 0.11
APOC1-208ENST00000592535 EYSQ5T1H1 3165 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 EIF5BO60841 1220 aaKnown RBP15.71■□□□□ 0.11
APOC1-208ENST00000592535 PSAPP07602 524 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 KLRC1P26715 233 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 NEK4P51957 841 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 TMEM62Q0P6H9 643 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 NONOQ15233 471 aaKnown RBP eCLIP15.71■□□□□ 0.11
APOC1-208ENST00000592535 CCDC85BQ15834 202 aaPredicted RBP15.71■□□□□ 0.11
APOC1-208ENST00000592535 ME3Q16798 604 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 SLC5A5Q92911 643 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 GJA10Q969M2 543 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 GABBR1Q9UBS5 961 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 SAMM50Q9Y512 469 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 PCDHA10Q9Y5I2 948 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 MAFBQ9Y5Q3 323 aaPredicted RBP15.71■□□□□ 0.11
APOC1-208ENST00000592535 COL1A2P08123 1366 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 NLRC5Q86WI3 1866 aa15.71■□□□□ 0.11
APOC1-208ENST00000592535 PRRC2BQ5JSZ5 2229 aaKnown RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 LINC01553A4QN01 128 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 ZBTB42B2RXF5 422 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 DLL1O00548 723 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 GAS7O60861 476 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 UPP2O95045 317 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 RPLP2P05387 115 aaKnown RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 HTRA4P83105 476 aaPredicted RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 INF2Q27J81 1249 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 Q4G0T1 1027 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 LRCH2Q5VUJ6 765 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 IER5Q5VY09 327 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 TRMT1LQ7Z2T5 733 aaKnown RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 KRT25Q7Z3Z0 450 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 GTF3C6Q969F1 213 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 RIT2Q99578 217 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 TEKT3Q9BXF9 490 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 AGO3Q9H9G7 860 aaKnown RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 ORC3Q9UBD5 711 aaPredicted RBP15.7■□□□□ 0.1
APOC1-208ENST00000592535 INSL6Q9Y581 213 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 TRPV2Q9Y5S1 764 aa15.7■□□□□ 0.1
APOC1-208ENST00000592535 IGSF9BQ9UPX0 1349 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 WDR64B1ANS9 1081 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 M0QZ92 97 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 CHMP2AO43633 222 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 FDPSP14324 419 aaKnown RBP15.69■□□□□ 0.1
APOC1-208ENST00000592535 CYP3A7P24462 503 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 GRB10Q13322 594 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 KRT40Q6A162 431 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 BBXQ8WY36 941 aaPredicted RBP15.69■□□□□ 0.1
APOC1-208ENST00000592535 TOP1MTQ969P6 601 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 MBOAT7Q96N66 472 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 CELF4Q9BZC1 486 aaKnown RBP15.69■□□□□ 0.1
APOC1-208ENST00000592535 UNC45AQ9H3U1 944 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 DISC1Q9NRI5 854 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 MTCH2Q9Y6C9 303 aa15.69■□□□□ 0.1
APOC1-208ENST00000592535 TTC3P53804 2025 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 PSMD10O75832 226 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 C22orf31O95567 290 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 XBP1P17861 261 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 POU3F3P20264 500 aaPredicted RBP15.68■□□□□ 0.1
APOC1-208ENST00000592535 CD52P31358 61 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 ERVK-21P61565 698 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 MOXD1Q6UVY6 613 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 NME8Q8N427 588 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
APOC1-208ENST00000592535 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
APOC1-208ENST00000592535 TGS1Q96RS0 853 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms