RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 FBXO47Q5MNV8 452 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
SDF2-209ENST00000591903 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 PNMA1Q8ND90 353 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 RASGRP4Q8TDF6 673 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 GPR20Q99678 358 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 S1PR5Q9H228 398 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
SDF2-209ENST00000591903 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 NEDD4P46934 1319 aa11.74□□□□□ -0.53
SDF2-209ENST00000591903 PER2O15055 1255 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 SEC24BO95487 1268 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 LIFRP42702 1097 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 RCAN1P53805 252 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 ANKRD54Q6NXT1 300 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
SDF2-209ENST00000591903 DGLUCYQ7Z3D6 616 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 TBC1D32Q96NH3 1257 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 NECTIN4Q96NY8 510 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 AGXT2Q9BYV1 514 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 C22orf23Q9BZE7 217 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 MFSD1Q9H3U5 465 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 JMJD4Q9H9V9 463 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 ZSWIM5Q9P217 1185 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
SDF2-209ENST00000591903 ZNF292O60281 2723 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 B4E1Z4 1266 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 OPLAHO14841 1288 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 PARP1P09874 1014 aaKnown RBP11.72□□□□□ -0.53
SDF2-209ENST00000591903 TECP42680 631 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 KCNC3Q14003 757 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
SDF2-209ENST00000591903 IER5Q5VY09 327 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 VN1R2Q8NFZ6 395 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 LRFN2Q9ULH4 789 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
SDF2-209ENST00000591903 MED19A0JLT2 244 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 ERICH2A1L162 156 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 M0QZ92 97 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 FSCN2O14926 492 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 FIBPO43427 364 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 PPFIA3O75145 1194 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 FGF18O76093 207 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 BRD1O95696 1058 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 POLR2MP0CAP2 368 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 SCG2P13521 617 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 MRPS6P82932 125 aaKnown RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 ITIH3Q06033 890 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 CES5AQ6NT32 575 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 GIMAP8Q8ND71 665 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 LINC01599Q8WXQ3 324 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.53
SDF2-209ENST00000591903 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
SDF2-209ENST00000591903 MAP3K14Q99558 947 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 LZTS1Q9Y250 596 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 PCDHA1Q9Y5I3 950 aa11.71□□□□□ -0.53
SDF2-209ENST00000591903 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 ZBTB5O15062 677 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 RPS6KB1P23443 525 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 HOXA13P31271 388 aaPredicted RBP11.7□□□□□ -0.54
SDF2-209ENST00000591903 CD52P31358 61 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 EVCP57679 992 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
SDF2-209ENST00000591903 PUM1Q14671 1186 aaKnown RBP eCLIP11.7□□□□□ -0.54
SDF2-209ENST00000591903 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 SEC23AQ15436 765 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 SYCE2Q6PIF2 218 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 THNSL1Q8IYQ7 743 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 DNAJB3Q8WWF6 145 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 CASP10Q92851 521 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 RMDN1Q96DB5 314 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
SDF2-209ENST00000591903 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 ZKSCAN3Q9BRR0 538 aa11.7□□□□□ -0.54
SDF2-209ENST00000591903 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms