RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CENPOQ9BU64 300 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 RWDD2AQ9UIY3 292 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 A8MUI8 341 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TROVE2P10155 538 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP2C1P98194 919 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 C2orf54Q08AI8 447 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM14Q14142 442 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 WDR60Q8WVS4 1066 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 INIPQ9NRY2 104 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 AKR1B10O60218 316 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 HIP1RO75146 1068 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 SERPINB4P48594 390 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 HSPA2P54652 639 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TROAPQ12815 778 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF34Q8IZ26 560 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ANKS4BQ8N8V4 417 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 BHMTQ93088 406 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 CAVIN3Q969G5 261 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 ABTB1Q969K4 478 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 HIC2Q96JB3 615 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
SMARCA4-217ENST00000591595 MYH7P12883 1935 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 NDUFA10O95299 355 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 PRCPP42785 496 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 IQCKQ8N0W5 287 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 RASGRP4Q8TDF6 673 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 USP33Q8TEY7 942 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 PYM1Q9BRP8 204 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 OSBPL10Q9BXB5 764 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF180Q9UJW8 692 aa13.27□□□□□ -0.28
SMARCA4-217ENST00000591595 ITIH6Q6UXX5 1313 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 GNA14O95837 355 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 SCG2P13521 617 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 UBA7P41226 1012 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 GSTM4Q03013 218 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 NSUN2Q08J23 767 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 ZNF658Q5TYW1 1059 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 FAAH2Q6GMR7 532 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 FBF1Q8TES7 1133 aa13.27□□□□□ -0.29
SMARCA4-217ENST00000591595 TTC26A0AVF1 554 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 HTR3EA5X5Y0 456 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 CETN3O15182 167 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 CMPK2Q5EBM0 449 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PTPRN2Q92932 1015 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 GBP5Q96PP8 586 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 FAM192AQ9GZU8 254 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 MYO5AQ9Y4I1 1855 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 CCDC194A0A1B0GVG4 234 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 NEK2P51955 445 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 USH1GQ495M9 461 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PTF1AQ7RTS3 328 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 TTC30AQ86WT1 665 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 RUBCNQ92622 972 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 GPKOWQ92917 476 aaPredicted RBP eCLIP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 SUCLA2Q9P2R7 463 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 NID2Q14112 1375 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 TIMM44O43615 452 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 BAG3O95817 575 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 FUT2Q10981 343 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 SLC12A6Q9UHW9 1150 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 JAG2Q9Y219 1238 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 STK38LQ9Y2H1 464 aa13.26□□□□□ -0.29
SMARCA4-217ENST00000591595 PSMD14O00487 310 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 PSMA7O14818 248 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 TMOD1P28289 359 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 SULT2A1Q06520 285 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 ITGA7Q13683 1181 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DUS1LQ6P1R4 473 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DEPTORQ8TB45 409 aa13.25□□□□□ -0.29
SMARCA4-217ENST00000591595 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms