RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GUCD1Q96NT3 240 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 TEKT3Q9BXF9 490 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 KCNMB3Q9NPA1 279 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 YBX2Q9Y2T7 364 aaKnown RBP25.26■■□□□ 1.63
MBD3-208ENST00000590830 GTF3C3Q9Y5Q9 886 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 CHMP2AO43633 222 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 ZNF862O60290 1169 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 HBP1O60381 514 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 ATP2A2P16615 1042 aaKnown RBP25.25■■□□□ 1.63
MBD3-208ENST00000590830 MGAT3Q09327 533 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 ZNF697Q5TEC3 545 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 DBF4BQ8NFT6 615 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 TIFAQ96CG3 184 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 SAMM50Q9Y512 469 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 PCDHA2Q9Y5H9 948 aa25.25■■□□□ 1.63
MBD3-208ENST00000590830 CCNT1O60563 726 aaKnown RBP25.24■■□□□ 1.63
MBD3-208ENST00000590830 BAIAP3O94812 1187 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 MYOGP15173 224 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 UGCGQ16739 394 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 PLEKHG4Q58EX7 1191 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 MTHFD1LQ6UB35 978 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 HAS1Q92839 578 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 TNPO1Q92973 898 aaKnown RBP25.24■■□□□ 1.63
MBD3-208ENST00000590830 BRMS1Q9HCU9 246 aa25.24■■□□□ 1.63
MBD3-208ENST00000590830 IGSF9BQ9UPX0 1349 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 WNT7AO00755 349 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 GCFC2P16383 781 aaKnown RBP25.23■■□□□ 1.63
MBD3-208ENST00000590830 KLRC1P26715 233 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 WDR5P61964 334 aaKnown RBP25.23■■□□□ 1.63
MBD3-208ENST00000590830 MKRN4PQ13434 485 aaPredicted RBP25.23■■□□□ 1.63
MBD3-208ENST00000590830 TRIM29Q14134 588 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 TRMT1LQ7Z2T5 733 aaKnown RBP25.23■■□□□ 1.63
MBD3-208ENST00000590830 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 FAM49AQ9H0Q0 323 aaPredicted RBP25.23■■□□□ 1.63
MBD3-208ENST00000590830 TCEAL9Q9UHQ7 104 aa25.23■■□□□ 1.63
MBD3-208ENST00000590830 ST18O60284 1047 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 DEFB103AP81534 67 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 ZNF484Q5JVG2 852 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 TMCO2Q7Z6W1 182 aaPredicted RBP25.22■■□□□ 1.63
MBD3-208ENST00000590830 CKAP2LQ8IYA6 745 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 PHOSPHO2Q8TCD6 241 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 BBXQ8WY36 941 aaPredicted RBP25.22■■□□□ 1.63
MBD3-208ENST00000590830 C8orf76Q96K31 380 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 VAV3Q9UKW4 847 aa25.22■■□□□ 1.63
MBD3-208ENST00000590830 KAT6AQ92794 2004 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 TMEM265A0A087WTH1 108 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 ABHD14A-ACY1A0A1B0GW23 586 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 EML1O00423 815 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 SFNP31947 248 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 JAK3P52333 1124 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 HMGN5P82970 282 aaKnown RBP25.21■■□□□ 1.63
MBD3-208ENST00000590830 IKBKEQ14164 716 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 MIER3Q7Z3K6 550 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 TMX3Q96JJ7 454 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 FAM20AQ96MK3 541 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 SLC9A7Q96T83 725 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 NKX2-4Q9H2Z4 354 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 MSRAQ9UJ68 235 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 CDH23Q9H251 3354 aa25.21■■□□□ 1.63
MBD3-208ENST00000590830 COL1A2P08123 1366 aa25.2■■□□□ 1.63
MBD3-208ENST00000590830 SMIM35A0A1B0GVV1 85 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 STBD1O95210 358 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 LPIN1Q14693 890 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 GRIN2CQ14957 1233 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 RAB30Q15771 203 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.2■■□□□ 1.62
MBD3-208ENST00000590830 RSPH3Q86UC2 560 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 HERC6Q8IVU3 1022 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 FBXO18Q8NFZ0 1043 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 RDM1Q8NG50 284 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 CDX2Q99626 313 aaPredicted RBP25.2■■□□□ 1.62
MBD3-208ENST00000590830 NAP1L4Q99733 375 aaKnown RBP25.2■■□□□ 1.62
MBD3-208ENST00000590830 ZNF576Q9H609 170 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 PCDHA11Q9Y5I1 949 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 CDY2AQ9Y6F7 541 aa25.2■■□□□ 1.62
MBD3-208ENST00000590830 CHD9Q3L8U1 2897 aa25.19■■□□□ 1.62
MBD3-208ENST00000590830 C22orf31O95567 290 aa25.19■■□□□ 1.62
MBD3-208ENST00000590830 MRPS6P82932 125 aaKnown RBP25.19■■□□□ 1.62
MBD3-208ENST00000590830 TMEM62Q0P6H9 643 aa25.19■■□□□ 1.62
MBD3-208ENST00000590830 KIAA0319LQ8IZA0 1049 aa25.19■■□□□ 1.62
MBD3-208ENST00000590830 SEPT8Q92599 483 aa25.19■■□□□ 1.62
MBD3-208ENST00000590830 TBX3O15119 743 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 OATP04181 439 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 GHRP10912 638 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 PRKCEQ02156 737 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 PPP2R5CQ13362 524 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 FBXO47Q5MNV8 452 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 IL27Q8NEV9 243 aa25.18■■□□□ 1.62
MBD3-208ENST00000590830 KCNJ6P48051 423 aa25.17■■□□□ 1.62
MBD3-208ENST00000590830 SAFBQ15424 915 aaKnown RBP eCLIP25.17■■□□□ 1.62
MBD3-208ENST00000590830 FAM184AQ8NB25 1140 aa25.17■■□□□ 1.62
MBD3-208ENST00000590830 FAM167AQ96KS9 214 aa25.17■■□□□ 1.62
MBD3-208ENST00000590830 AGO3Q9H9G7 860 aaKnown RBP25.17■■□□□ 1.62
MBD3-208ENST00000590830 NRBP2Q9NSY0 501 aa25.17■■□□□ 1.62
MBD3-208ENST00000590830 STXBP5LQ9Y2K9 1186 aa25.17■■□□□ 1.62
MBD3-208ENST00000590830 ARHGEF15O94989 841 aa25.16■■□□□ 1.62
MBD3-208ENST00000590830 SPIRE1Q08AE8 756 aa25.16■■□□□ 1.62
MBD3-208ENST00000590830 IER5Q5VY09 327 aa25.16■■□□□ 1.62
MBD3-208ENST00000590830 NME8Q8N427 588 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms