RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 BACE2Q9Y5Z0 518 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 LY75O60449 1722 aa9.48□□□□□ -0.89
NEDD4L-230ENST00000590638 MYH14Q7Z406 1995 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 C2orf71A6NGG8 1288 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 FKTNO75072 461 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 IGHA1P01876 353 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 VAV1P15498 845 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 RGS3P49796 1198 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 EIF5P55010 431 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 MAP4K2Q12851 820 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 MTX1Q13505 466 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 SF1Q15637 639 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 ANKRD45Q5TZF3 282 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 CHD1LQ86WJ1 897 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 TMEM145Q8NBT3 493 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 CDADC1Q9BWV3 514 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 FOXP3Q9BZS1 431 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 NCOA5Q9HCD5 579 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 NUP98P52948 1817 aa9.47□□□□□ -0.89
NEDD4L-230ENST00000590638 ANKRD36CQ5JPF3 1778 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 WASH4PA8MWX3 477 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 PLD2O14939 933 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 DLX3O60479 287 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 DNAJC6O75061 913 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 HMGB1P09429 215 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 ENDOUP21128 410 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 IBSPP21815 317 aaPredicted RBP9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 RNF111Q6ZNA4 994 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 USP53Q70EK8 1073 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 PPP1R42Q7Z4L9 355 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 SSH3Q8TE77 659 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 ASB11Q8WXH4 323 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 ISCA1Q9BUE6 129 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 MRPL4Q9BYD3 311 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 SPC25Q9HBM1 224 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 NDOR1Q9UHB4 597 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 SFMBT1Q9UHJ3 866 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 COL15A1P39059 1388 aa9.46□□□□□ -0.9
NEDD4L-230ENST00000590638 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 PNMA6EA0A0J9YXQ4 647 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 AURKAO14965 403 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 SRGAP3O43295 1099 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 IFNGR1P15260 489 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 AOC3Q16853 763 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 PRSS53Q2L4Q9 553 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 HSP90AB4PQ58FF6 505 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 NAT16Q8N8M0 369 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 SUCLG2Q96I99 432 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 FCRL3Q96P31 734 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 SLC12A9Q9BXP2 914 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 ATP13A1Q9HD20 1204 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 CCNL1Q9UK58 526 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 PITPNM2Q9BZ72 1349 aa9.45□□□□□ -0.9
NEDD4L-230ENST00000590638 RAB11FIP3O75154 756 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 ZNF205O95201 554 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 TGFB1P01137 390 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 SCG5P05408 212 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 GABREP78334 506 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 EGR3Q06889 387 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 PABPC4Q13310 644 aaKnown RBP eCLIP9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 FNDC3BQ53EP0 1204 aaKnown RBP9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 EEF1DP3Q658K8 133 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 UBE3BQ7Z3V4 1068 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 PPIL6Q8IXY8 311 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 NIM1KQ8IY84 436 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 SEMA6BQ9H3T3 888 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 SEMA3GQ9NS98 782 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 PCDHA11Q9Y5I1 949 aa9.44□□□□□ -0.9
NEDD4L-230ENST00000590638 BLACEA4D250 179 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 RPS6KA4O75676 772 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 CAPNS1P04632 268 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 THBDP07204 575 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 FURINP09958 794 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 RPL10P27635 214 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 PRKCQQ04759 706 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 IKZF1Q13422 519 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 HLFQ16534 295 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 NINJ1Q92982 152 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 MFSD3Q96ES6 412 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 MISP3Q96FF7 219 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 MCMBPQ9BTE3 642 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 LRRCC1Q9C099 1032 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 BICC1Q9H694 974 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 GPRC5CQ9NQ84 441 aa9.43□□□□□ -0.9
NEDD4L-230ENST00000590638 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms