RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 SMIM35A0A1B0GVV1 85 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 MARCH6O60337 910 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
CTDP1-206ENST00000590635 PSMD10O75832 226 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
CTDP1-206ENST00000590635 TDP2O95551 362 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 IGBP1P78318 339 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 MARCH8Q5T0T0 291 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 USP38Q8NB14 1042 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 ZNF576Q9H609 170 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 GABBR1Q9UBS5 961 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 STXBP5LQ9Y2K9 1186 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 SQORQ9Y6N5 450 aa13.73□□□□□ -0.21
CTDP1-206ENST00000590635 LAMA2P24043 3122 aaKnown RBP13.73□□□□□ -0.21
CTDP1-206ENST00000590635 MAGEB2O15479 319 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 JAK2O60674 1132 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTDP1-206ENST00000590635 KRT40Q6A162 431 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 Q7L0L9 218 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 MIER3Q7Z3K6 550 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
CTDP1-206ENST00000590635 SLFN12Q8IYM2 578 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 DNAJB3Q8WWF6 145 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 GJB4Q9NTQ9 266 aa13.72□□□□□ -0.21
CTDP1-206ENST00000590635 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 CTSHP09668 335 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 KLRC1P26715 233 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 TMOD1P28289 359 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 WDR5P61964 334 aaKnown RBP13.71□□□□□ -0.21
CTDP1-206ENST00000590635 MBTPS1Q14703 1052 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 ODR4Q5SWX8 454 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 MTHFD1LQ6UB35 978 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 OXER1Q8TDS5 423 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 UIMC1Q96RL1 719 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 KCNMB3Q9NPA1 279 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
CTDP1-206ENST00000590635 KAT6AQ92794 2004 aa13.71□□□□□ -0.22
CTDP1-206ENST00000590635 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
CTDP1-206ENST00000590635 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 CHMP2AO43633 222 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 CHRNA1P02708 482 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 AMHP03971 560 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 ATP4AP20648 1035 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 PBX2P40425 430 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 MRPS6P82932 125 aaKnown RBP13.7□□□□□ -0.22
CTDP1-206ENST00000590635 NR5A1Q13285 461 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 B3GNT9Q6UX72 402 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 RUFY4Q6ZNE9 571 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 FBXO18Q8NFZ0 1043 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
CTDP1-206ENST00000590635 FAM49AQ9H0Q0 323 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-206ENST00000590635 TTYH1Q9H313 450 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-206ENST00000590635 FOXP1Q9H334 677 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-206ENST00000590635 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
CTDP1-206ENST00000590635 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 TLL1O43897 1013 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 OATP04181 439 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 MGAT3Q09327 533 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
CTDP1-206ENST00000590635 XKR3Q5GH77 459 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 EXOC8Q8IYI6 725 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
CTDP1-206ENST00000590635 RAD9AQ99638 391 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
CTDP1-206ENST00000590635 TRPV2Q9Y5S1 764 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
CTDP1-206ENST00000590635 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 SLC37A4O43826 429 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 GJB5O95377 273 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
CTDP1-206ENST00000590635 RABGGTBP53611 331 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 PSMC5P62195 406 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 ORC2Q13416 577 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-206ENST00000590635 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 KIAA0319LQ8IZA0 1049 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
CTDP1-206ENST00000590635 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-206ENST00000590635 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
CTDP1-206ENST00000590635 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms