RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FAM184BQ9ULE4 1060 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 KIF1AQ12756 1690 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 CD58P19256 250 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 INPP5BP32019 993 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 ERVK-24P63145 666 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-208ENST00000589797 ANGEL2Q5VTE6 544 aaKnown RBP15.88■□□□□ 0.13
RETREG3-208ENST00000589797 PLA2G4FQ68DD2 849 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 C10orf67Q8IYJ2 551 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 MTUS1Q9ULD2 1270 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 NYAP1Q6ZVC0 841 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 DEFB129Q9H1M3 183 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 FAN1Q9Y2M0 1017 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 CEP83Q9Y592 693 aa15.88■□□□□ 0.13
RETREG3-208ENST00000589797 CXCL9Q07325 125 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 GLYCTKQ8IVS8 523 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 SERPINA10Q9UK55 444 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 CAPN11Q9UMQ6 739 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 PDS5AQ29RF7 1337 aaKnown RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 HEXIM1O94992 359 aaKnown RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 GAP43P17677 238 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 KCTD19Q17RG1 926 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 KAZNQ674X7 775 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 AFAP1L1Q8TED9 768 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 ATP6V0A1Q93050 837 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 VCPKMTQ9H867 229 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 EHD2Q9NZN4 543 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 JRKLQ9Y4A0 524 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 DKC1O60832 514 aaKnown RBP eCLIP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 SERPING1P05155 500 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 ELMO3Q96BJ8 720 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 MSH4O15457 936 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 HIP1RO75146 1068 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 TUBBP07437 444 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 GMPSP49915 693 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-208ENST00000589797 SNX1Q13596 522 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 MS4A14Q96JA4 679 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 NLRP4Q96MN2 994 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 ACCSQ96QU6 501 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 C1orf112Q9NSG2 853 aa15.87■□□□□ 0.13
RETREG3-208ENST00000589797 RGPD5Q99666 1765 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 ACTN2P35609 894 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 SARSP49591 514 aaKnown RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 TUBB4BP68371 445 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 TFAMQ00059 246 aaKnown RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 UBL4BQ8N7F7 174 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 APOL6Q9BWW8 343 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 ANKRD65E5RJM6 399 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 ARP10275 920 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 DESP17661 470 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 ZNF211Q13398 564 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 DGKZQ13574 1117 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 SUPT20HL1Q3ZLR7 823 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 GLIS2Q9BZE0 524 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 LACRTQ9GZZ8 138 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 INTS13Q9NVM9 706 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 FEM1BQ9UK73 627 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 QARSP47897 775 aaKnown RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 THNSL1Q8IYQ7 743 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 ATG4CQ96DT6 458 aa15.86■□□□□ 0.13
RETREG3-208ENST00000589797 SETD1AO15047 1707 aaKnown RBP15.86■□□□□ 0.13
RETREG3-208ENST00000589797 DENND3A2RUS2 1198 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 ZNF18P17022 549 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 GBP2P32456 591 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-208ENST00000589797 CASP4P49662 377 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 USP14P54578 494 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 KRT71Q3SY84 523 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 TTI2Q6NXR4 508 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-208ENST00000589797 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-208ENST00000589797 A0A1W2PRG0 241 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 TMEM150BA6NC51 233 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 ENTPD3O75355 529 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 KCTD2Q14681 263 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 DACT2Q5SW24 774 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 SCARA5Q6ZMJ2 495 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 NOA1Q8NC60 698 aaKnown RBP15.85■□□□□ 0.13
RETREG3-208ENST00000589797 MMS19Q96T76 1030 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 FAM213AQ9BRX8 229 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 TRIM6Q9C030 488 aaPredicted RBP15.85■□□□□ 0.13
RETREG3-208ENST00000589797 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 GPRC5CQ9NQ84 441 aa15.85■□□□□ 0.13
RETREG3-208ENST00000589797 DNAJC17Q9NVM6 304 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms