RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
VAT1-206ENST00000589709 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
VAT1-206ENST00000589709 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
VAT1-206ENST00000589709 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
VAT1-206ENST00000589709 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
VAT1-206ENST00000589709 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
VAT1-206ENST00000589709 KDM3AQ9Y4C1 1321 aa13.9□□□□□ -0.19
VAT1-206ENST00000589709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 HBP1O60381 514 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 RB1P06400 928 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 IFNAR1P17181 557 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 CIITAP33076 1130 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 ERICH6BQ5W0A0 696 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 FIBCD1Q8N539 461 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 ATP8B4Q8TF62 1192 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 ZBTB10Q96DT7 871 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
VAT1-206ENST00000589709 TRPV2Q9Y5S1 764 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 SIP14410 1827 aa13.89□□□□□ -0.19
VAT1-206ENST00000589709 COL1A2P08123 1366 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 C5orf67F2Z3F1 127 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 M0QZ92 97 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 BACH1O14867 736 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 KLRC1P26715 233 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 GPM6BQ13491 265 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
VAT1-206ENST00000589709 MIS18BP1Q6P0N0 1132 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 CRIPAKQ8N1N5 446 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 PHKBQ93100 1093 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 RWDD3Q9Y3V2 267 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
VAT1-206ENST00000589709 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
VAT1-206ENST00000589709 BRWD1Q9NSI6 2320 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 TTC3P53804 2025 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 DDX39AO00148 427 aaKnown RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 LINC00271P0C7V0 271 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 CD52P31358 61 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 BMPR1AP36894 532 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 KRT76Q01546 638 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 RUFY3Q7L099 469 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 CLP1Q92989 425 aaKnown RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 NECAB3Q96P71 396 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 UBE2ZQ9H832 354 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 PADI3Q9ULW8 664 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 MAFBQ9Y5Q3 323 aaPredicted RBP13.87□□□□□ -0.19
VAT1-206ENST00000589709 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 MUC3AQ02505 3323 aa13.87□□□□□ -0.19
VAT1-206ENST00000589709 XIRP2A4UGR9 3374 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 TCF20Q9UGU0 1960 aaKnown RBP13.86□□□□□ -0.19
VAT1-206ENST00000589709 DGKIO75912 1065 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 ATP4AP20648 1035 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 USP11P51784 963 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 COL19A1Q14993 1142 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 LEXMQ3ZCV2 418 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 KIAA0319LQ8IZA0 1049 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 LINC01599Q8WXQ3 324 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
VAT1-206ENST00000589709 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 LMAN2LQ9H0V9 348 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 PCDHA10Q9Y5I2 948 aa13.86□□□□□ -0.19
VAT1-206ENST00000589709 ZBTB42B2RXF5 422 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 PSAPP07602 524 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 CCT2P78371 535 aaKnown RBP13.85□□□□□ -0.19
VAT1-206ENST00000589709 PAK2Q13177 524 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
VAT1-206ENST00000589709 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
VAT1-206ENST00000589709 PRR16Q569H4 304 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 NPAS4Q8IUM7 802 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 TRIM22Q8IYM9 498 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
VAT1-206ENST00000589709 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
VAT1-206ENST00000589709 LENG9Q96B70 501 aa13.85□□□□□ -0.19
VAT1-206ENST00000589709 ZNF274Q96GC6 653 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms