RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 IGBP1P78318 339 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 SKIV2LQ15477 1246 aaKnown RBP12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 PRR16Q569H4 304 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 ZNF746Q6NUN9 644 aaPredicted RBP12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 PLPPR4Q7Z2D5 763 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 VWCEQ96DN2 955 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 ZNF302Q9NR11 478 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 COL1A2P08123 1366 aa12.01□□□□□ -0.49
CLPTM1-211ENST00000589347 TTC3P53804 2025 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 IGLV3-22A0A075B6J6 115 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 POTEB3A0JP26 581 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 PFKFB2O60825 505 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 PPFIA3O75145 1194 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CA3P07451 260 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 PSAPP07602 524 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CIITAP33076 1130 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 USP11P51784 963 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 AK2P54819 239 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 ADAM17P78536 824 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 SCRN1Q12765 414 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 HIC1Q14526 733 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 PLEKHG4Q58EX7 1191 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 POTEBQ6S5H4 581 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 KRT25Q7Z3Z0 450 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 RPAINQ86UA6 219 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CRYGNQ8WXF5 182 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM167AQ96KS9 214 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
CLPTM1-211ENST00000589347 TEKT3Q9BXF9 490 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CD320Q9NPF0 282 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 SAMM50Q9Y512 469 aa12□□□□□ -0.49
CLPTM1-211ENST00000589347 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 MBLAC1A4D2B0 266 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 WDR64B1ANS9 1081 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 HBP1O60381 514 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 ATG7O95352 703 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 MYOGP15173 224 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 NHLH1Q02575 133 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 PLCB4Q15147 1175 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM26DQ5JW98 314 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 PDXDC2PQ6P474 469 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 CKAP2LQ8IYA6 745 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 TBCKQ8TEA7 893 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 IL17RAQ96F46 866 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 IFIH1Q9BYX4 1025 aaKnown RBP11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 TPCN1Q9ULQ1 816 aa11.99□□□□□ -0.49
CLPTM1-211ENST00000589347 GAS7O60861 476 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 GJB5O95377 273 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 INSRRP14616 1297 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 SFNP31947 248 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 JAK3P52333 1124 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 DEFB103AP81534 67 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 MRPS6P82932 125 aaKnown RBP11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 Q4G0T1 1027 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 LRCH2Q5VUJ6 765 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 IER5Q5VY09 327 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 MOXD1Q6UVY6 613 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 ABHD15Q6UXT9 468 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 RUFY4Q6ZNE9 571 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 CCDC60Q8IWA6 550 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 DBF4BQ8NFT6 615 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 ATP8B4Q8TF62 1192 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 HLA-CQ95604 372 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 GTF3C6Q969F1 213 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 PCYT2Q99447 389 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 FAM49AQ9H0Q0 323 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 KCNH6Q9H252 994 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 PCDHA10Q9Y5I2 948 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 TRPV2Q9Y5S1 764 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 CDY2AQ9Y6F7 541 aa11.98□□□□□ -0.49
CLPTM1-211ENST00000589347 C5orf42Q9H799 3197 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 IGSF9BQ9UPX0 1349 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 IGKV6D-21A0A0A0MT36 114 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 SMIM35A0A1B0GVV1 85 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 RFXAPO00287 272 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 CCNE2O96020 404 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 GCFC2P16383 781 aaKnown RBP11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 NEK4P51957 841 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 MGAT3Q09327 533 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 TRIM29Q14134 588 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 GPNMBQ14956 572 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 ZNF484Q5JVG2 852 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 ODR4Q5SWX8 454 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 KRT40Q6A162 431 aa11.97□□□□□ -0.49
CLPTM1-211ENST00000589347 TSHZ1Q6ZSZ6 1077 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms