RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 STAT3P40763 770 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PRMT2P55345 433 aa11□□□□□ -0.65
VPS25-202ENST00000589219 LACTBP83111 547 aaPredicted RBP11□□□□□ -0.65
VPS25-202ENST00000589219 GHRHRQ02643 423 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PPP2R3AQ06190 1150 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PPP2R5CQ13362 524 aa11□□□□□ -0.65
VPS25-202ENST00000589219 ELF2Q15723 593 aa11□□□□□ -0.65
VPS25-202ENST00000589219 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
VPS25-202ENST00000589219 POTEGQ6S5H5 508 aa11□□□□□ -0.65
VPS25-202ENST00000589219 POTEEQ6S8J3 1075 aa11□□□□□ -0.65
VPS25-202ENST00000589219 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
VPS25-202ENST00000589219 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
VPS25-202ENST00000589219 SLC5A5Q92911 643 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PCMTD1Q96MG8 357 aaPredicted RBP11□□□□□ -0.65
VPS25-202ENST00000589219 FEZ1Q99689 392 aa11□□□□□ -0.65
VPS25-202ENST00000589219 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
VPS25-202ENST00000589219 NDST4Q9H3R1 872 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PICK1Q9NRD5 415 aa11□□□□□ -0.65
VPS25-202ENST00000589219 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
VPS25-202ENST00000589219 SIK3Q9Y2K2 1263 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PCDHA2Q9Y5H9 948 aa11□□□□□ -0.65
VPS25-202ENST00000589219 UBE4BO95155 1302 aa11□□□□□ -0.65
VPS25-202ENST00000589219 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
VPS25-202ENST00000589219 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
VPS25-202ENST00000589219 PDHXO00330 501 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 CXCL11O14625 94 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 FANCGO15287 622 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 TBCAO75347 108 aaKnown RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 CFBP00751 764 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 ICAM1P05362 532 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 HOXD10P28358 340 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 HOXA13P31271 388 aaPredicted RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 HNRNPH3P31942 346 aaKnown RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 HSD17B4P51659 736 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 TUBB4BP68371 445 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 BMT2Q1RMZ1 405 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 CCDC40Q4G0X9 1142 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 HERC4Q5GLZ8 1057 aaPredicted RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 NIPA1Q7RTP0 329 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 TXLNBQ8N3L3 684 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 GJA10Q969M2 543 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 WDR24Q96S15 920 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 NAPGQ99747 312 aaPredicted RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 SLF1Q9BQI6 1058 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 TSGA10Q9BZW7 698 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 NUCKS1Q9H1E3 243 aaKnown RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 HAUS4Q9H6D7 363 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 FAM184BQ9ULE4 1060 aa10.99□□□□□ -0.65
VPS25-202ENST00000589219 EPN1Q9Y6I3 576 aaPredicted RBP10.99□□□□□ -0.65
VPS25-202ENST00000589219 CTAGE9A4FU28 777 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 CTNND1O60716 968 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 GAS7O60861 476 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 PSMD10O75832 226 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 FDX1P10109 184 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 ARHGAP25P42331 645 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 GIT2Q14161 759 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 CEP55Q53EZ4 464 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 C17orf99Q6UX52 265 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 SCYL3Q8IZE3 742 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 CEP112Q8N8E3 955 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 UBXN4Q92575 508 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 ZNF333Q96JL9 665 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 PARK7Q99497 189 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 EIF2AK1Q9BQI3 630 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 WDR18Q9BV38 432 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 CARD6Q9BX69 1037 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 TEKT3Q9BXF9 490 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 ARGLU1Q9NWB6 273 aaPredicted RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 MAP3K20Q9NYL2 800 aaKnown RBP10.98□□□□□ -0.65
VPS25-202ENST00000589219 KCND2Q9NZV8 630 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 CCPG1Q9ULG6 757 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 PTCH2Q9Y6C5 1203 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 FRMPD4Q14CM0 1322 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 RPTORQ8N122 1335 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 DOCK1Q14185 1865 aa10.98□□□□□ -0.65
VPS25-202ENST00000589219 PHF20L1A8MW92 1017 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 CETN3O15182 167 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 EIF3DO15371 548 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS25-202ENST00000589219 SLC16A3O15427 465 aaKnown RBP10.97□□□□□ -0.65
VPS25-202ENST00000589219 BCRP11274 1271 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 TAL1P17542 331 aaPredicted RBP10.97□□□□□ -0.65
VPS25-202ENST00000589219 PTPRAP18433 802 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 USP14P54578 494 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 CAP1Q01518 475 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS25-202ENST00000589219 LRRC41Q15345 812 aa10.97□□□□□ -0.65
VPS25-202ENST00000589219 WHAMMP3Q1A5X7 153 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms