RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 KCNJ14Q9UNX9 436 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 EMSYQ7Z589 1322 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 VCANP13611 3396 aa13.11□□□□□ -0.31
RFX1-204ENST00000588885 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
RFX1-204ENST00000588885 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 EDIL3O43854 480 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 USP38Q8NB14 1042 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 SEPT8Q92599 483 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
RFX1-204ENST00000588885 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 PFKFB2O60825 505 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 UPP2O95045 317 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 ATG7O95352 703 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 GHRP10912 638 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 TAP1Q03518 808 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 MIS18BP1Q6P0N0 1132 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 TAF2Q6P1X5 1199 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 PDXDC2PQ6P474 469 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
RFX1-204ENST00000588885 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 BLIDQ8IZY5 108 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 ARNTL2Q8WYA1 636 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
RFX1-204ENST00000588885 ZNF302Q9NR11 478 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
RFX1-204ENST00000588885 PTPRSQ13332 1948 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.32
RFX1-204ENST00000588885 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 RRN3P2A6NIE6 340 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
RFX1-204ENST00000588885 MSH4O15457 936 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 CAND2O75155 1236 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 CDKL5O76039 1030 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 LARGE1O95461 756 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 AMHP03971 560 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 CIITAP33076 1130 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
RFX1-204ENST00000588885 BECN1Q14457 450 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
RFX1-204ENST00000588885 FAM26DQ5JW98 314 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 LENG9Q96B70 501 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 RAD9AQ99638 391 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
RFX1-204ENST00000588885 IGKV6D-21A0A0A0MT36 114 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 CHMP2AO43633 222 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 EFCAB14O75071 495 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 GJB5O95377 273 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 TDP2O95551 362 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 ATP4AP20648 1035 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 KLRC1P26715 233 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 USP11P51784 963 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 FOSBP53539 338 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 LPIN1Q14693 890 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 NPY5RQ15761 445 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 ME3Q16798 604 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 INF2Q27J81 1249 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 MTHFD1LQ6UB35 978 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
RFX1-204ENST00000588885 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
RFX1-204ENST00000588885 IFIH1Q9BYX4 1025 aaKnown RBP13.07□□□□□ -0.32
RFX1-204ENST00000588885 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 ORC3Q9UBD5 711 aaPredicted RBP13.07□□□□□ -0.32
RFX1-204ENST00000588885 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 PCDHA10Q9Y5I2 948 aa13.07□□□□□ -0.32
RFX1-204ENST00000588885 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
RFX1-204ENST00000588885 HBP1O60381 514 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 GAS7O60861 476 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 PSAPP07602 524 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 MCM2P49736 904 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
RFX1-204ENST00000588885 MGAT3Q09327 533 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 KRT40Q6A162 431 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 ZNF746Q6NUN9 644 aaPredicted RBP13.06□□□□□ -0.32
RFX1-204ENST00000588885 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 ATP8B4Q8TF62 1192 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 GINS2Q9Y248 185 aa13.06□□□□□ -0.32
RFX1-204ENST00000588885 PCDHA2Q9Y5H9 948 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms