RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TBX3O15119 743 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
VMP1-208ENST00000588617 NDUFS2O75306 463 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 CLEC2LP0C7M8 214 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 TMEM253P0C7T8 217 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 TEKQ02763 1124 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 UGT8Q16880 541 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 TMEM95Q3KNT9 176 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 DUSP27Q5VZP5 1158 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 CCDC149Q6ZUS6 474 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 SKAP1Q86WV1 359 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 SPACA3Q8IXA5 215 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 SIRT2Q8IXJ6 389 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 FAM181AQ8N9Y4 354 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 EAF2Q96CJ1 260 aaPredicted RBP9.54□□□□□ -0.88
VMP1-208ENST00000588617 DCAF5Q96JK2 942 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 FCRL2Q96LA5 508 aaPredicted RBP9.54□□□□□ -0.88
VMP1-208ENST00000588617 SLC6A20Q9NP91 592 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 USP36Q9P275 1121 aaKnown RBP9.54□□□□□ -0.88
VMP1-208ENST00000588617 U3KQE9 123 aa9.54□□□□□ -0.88
VMP1-208ENST00000588617 HMX2A2RU54 273 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 KRIT1O00522 736 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 EGR3Q06889 387 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 STK3Q13188 491 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 SEC23AQ15436 765 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 LONRF1Q17RB8 773 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 UAP1L1Q3KQV9 507 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 TXNRD3Q86VQ6 643 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 CXorf67Q86X51 503 aaPredicted RBP9.53□□□□□ -0.88
VMP1-208ENST00000588617 CAMKK1Q8N5S9 505 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 PPM1NQ8N819 430 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 ANKRD42Q8N9B4 389 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 FAM156AQ8NDB6 213 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 ACRBPQ8NEB7 543 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 PPP1R35Q8TAP8 253 aa9.53□□□□□ -0.88
VMP1-208ENST00000588617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.53□□□□□ -0.88
VMP1-208ENST00000588617 PQBP1O60828 265 aaKnown RBP9.52□□□□□ -0.89
VMP1-208ENST00000588617 EPHA7Q15375 998 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 TMPRSS7Q7RTY8 843 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 OVCH2Q7RTZ1 564 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 UHMK1Q8TAS1 419 aaKnown RBP9.52□□□□□ -0.89
VMP1-208ENST00000588617 PLEKHO2Q8TD55 490 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 C16orf92Q96LL3 132 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 TUBD1Q9UJT1 453 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 ZNF281Q9Y2X9 895 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 RWDD3Q9Y3V2 267 aa9.52□□□□□ -0.89
VMP1-208ENST00000588617 ITGB2P05107 769 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 SETSIPP0DME0 302 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 SLC5A1P13866 664 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 PDCP20941 246 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 CLCN7P51798 805 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 POU5F1BQ06416 359 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.51□□□□□ -0.89
VMP1-208ENST00000588617 MROH9Q5TGP6 573 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 XRRA1Q6P2D8 792 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 ESPNLQ6ZVH7 1005 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 C1GALT1C1Q96EU7 318 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 MVB12AQ96EY5 273 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 SEMA4AQ9H3S1 761 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 C7orf69Q9H7B7 122 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 SEMA3GQ9NS98 782 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 TERF2IPQ9NYB0 399 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
VMP1-208ENST00000588617 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
VMP1-208ENST00000588617 HRGP04196 525 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 MTHFD2P13995 350 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 HALP42357 657 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 FNTBP49356 437 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 PPM1FP49593 454 aaPredicted RBP9.5□□□□□ -0.89
VMP1-208ENST00000588617 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.89
VMP1-208ENST00000588617 ALDH5A1P51649 535 aaPredicted RBP9.5□□□□□ -0.89
VMP1-208ENST00000588617 MANFP55145 182 aaKnown RBP9.5□□□□□ -0.89
VMP1-208ENST00000588617 MOGSQ13724 837 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 USP45Q70EL2 814 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 KCNK18Q7Z418 384 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 NME9Q86XW9 330 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 PAF1Q8N7H5 531 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 HERPUD2Q9BSE4 406 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 PCDHGB6Q9Y5F9 930 aa9.5□□□□□ -0.89
VMP1-208ENST00000588617 BUB1BO60566 1050 aaPredicted RBP9.49□□□□□ -0.89
VMP1-208ENST00000588617 TUSC2O75896 110 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 IGHA1P01876 353 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 CEACAM5P06731 702 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 SLC5A3P53794 718 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 MRPS9P82933 396 aaKnown RBP9.49□□□□□ -0.89
VMP1-208ENST00000588617 CATSPEREQ5SY80 951 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 KCTD1Q719H9 257 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 RIOX2Q8IUF8 465 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 RBM12BQ8IXT5 1001 aaKnown RBP9.49□□□□□ -0.89
VMP1-208ENST00000588617 SMAP1Q8IYB5 467 aaPredicted RBP9.49□□□□□ -0.89
VMP1-208ENST00000588617 THEMISQ8N1K5 641 aaPredicted RBP9.49□□□□□ -0.89
VMP1-208ENST00000588617 COA7Q96BR5 231 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 RIC8BQ9NVN3 520 aa9.49□□□□□ -0.89
VMP1-208ENST00000588617 STOML1Q9UBI4 398 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms