RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 P2RX5Q93086 422 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 GBP3Q9H0R5 595 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 KIF9Q9HAQ2 790 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 SLC38A10Q9HBR0 1119 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 RAB21Q9UL25 225 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 ASTN2O75129 1339 aaPredicted RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 MSH4O15457 936 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 URI1O94763 535 aaPredicted RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 VCAM1P19320 739 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 MUTP22033 750 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 RPA1P27694 616 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 PBX1P40424 430 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 EHHADHQ08426 723 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 TRIM14Q14142 442 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 KRT31Q15323 416 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 HSP90AA4PQ58FG1 418 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 TTI2Q6NXR4 508 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 KRT26Q7Z3Y9 468 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 FCHSD1Q86WN1 690 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 GUF1Q8N442 669 aaKnown RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 DDX12PQ92771 950 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 MAGEC2Q9UBF1 373 aaPredicted RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF536O15090 1300 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 SBF1O95248 1867 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 PARP14Q460N5 1801 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 EZRP15311 586 aaKnown RBP10.58□□□□□ -0.72
LINC01539-201ENST00000587904 BACE1P56817 501 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 MTMR2Q13614 643 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 CEP55Q53EZ4 464 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 ARHGAP27Q6ZUM4 889 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
LINC01539-201ENST00000587904 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 PIK3R5Q8WYR1 880 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 WRNIP1Q96S55 665 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 POLR3CQ9BUI4 534 aaPredicted RBP10.58□□□□□ -0.72
LINC01539-201ENST00000587904 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 TANGO6Q9C0B7 1094 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 MAF1Q9H063 256 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 GGA3Q9NZ52 723 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 CAPN7Q9Y6W3 813 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 FRMPD4Q14CM0 1322 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 RPTORQ8N122 1335 aa10.58□□□□□ -0.72
LINC01539-201ENST00000587904 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 POTECB2RU33 542 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 ZBED4O75132 1171 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 RTN3O95197 1032 aaPredicted RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 FGFR1OPO95684 399 aaKnown RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PLA2G4BP0C869 781 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 BCRP11274 1271 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PTPRAP18433 802 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 ARHGAP25P42331 645 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 COPB1P53618 953 aaKnown RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 SMTNP53814 917 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 LRRC63Q05C16 580 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 STK4Q13043 487 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 NCAPH2Q6IBW4 605 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CENPPQ6IPU0 288 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 TRIM65Q6PJ69 517 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 KCNK18Q7Z418 384 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CCDC65Q8IXS2 484 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 KIAA0895Q8NCT3 520 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 OR8K1Q8NGG5 319 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PARD3BQ8TEW8 1205 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CCDC51Q96ER9 411 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 FAM204AQ9H8W3 233 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 VIPAS39Q9H9C1 493 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 EMILIN3Q9NT22 766 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 L1RE1Q9UN81 338 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 ZNF232Q9UNY5 417 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 MAPK8IP1Q9UQF2 711 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 CTDP1Q9Y5B0 961 aaPredicted RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 N4BP3O15049 544 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 ARHGAP6O43182 974 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 STX10O60499 249 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 MED24O75448 989 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 FLOT1O75955 427 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 TAL1P17542 331 aaPredicted RBP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC01539-201ENST00000587904 OAZ1P54368 228 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PPP2R3AQ06190 1150 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PPP2R5CQ13362 524 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 ECM1Q16610 540 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 B4GALNT4Q76KP1 1039 aa10.57□□□□□ -0.72
LINC01539-201ENST00000587904 PPFIBP1Q86W92 1011 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms