RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 DHX58Q96C10 678 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 TSEN34Q9BSV6 310 aaKnown RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 NUP62CLQ9H1M0 184 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 KBTBD4Q9NVX7 518 aa11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 DDX20Q9UHI6 824 aaKnown RBP11.55□□□□□ -0.56
CLPTM1-207ENST00000587537 COL1A2P08123 1366 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 DYNC1LI2O43237 492 aaPredicted RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 HBP1O60381 514 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 OATP04181 439 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 RPLP2P05387 115 aaKnown RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 LIG1P18858 919 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 CDC25AP30304 524 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 YWHABP31946 246 aaKnown RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 LBX1P52954 281 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 CAP1Q01518 475 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 PDILTQ8N807 584 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 SYT2Q8N9I0 419 aaPredicted RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 TRPV1Q8NER1 839 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 ATP8B4Q8TF62 1192 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 AFG1LQ8WV93 481 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 PNMA5Q96PV4 448 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 NIFKQ9BYG3 293 aaKnown RBP11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 XPNPEP3Q9NQH7 507 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 RMND1Q9NWS8 449 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 GABBR1Q9UBS5 961 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 PCNTO95613 3336 aa11.54□□□□□ -0.56
CLPTM1-207ENST00000587537 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 MOXD2PA6NHM9 499 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 DGAT1O75907 488 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 F2P00734 622 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 LGALS2P05162 132 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 PLA2G4BP0C869 781 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 ABCD1P33897 745 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 RFC5P40937 340 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 PRKCEQ02156 737 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 SP4Q02446 784 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 CTTNQ14247 550 aaKnown RBP11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 ZRSR1Q15695 479 aaKnown RBP11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 LONRF3Q496Y0 759 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 ZNF484Q5JVG2 852 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 SLC17A8Q8NDX2 589 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 MCPH1Q8NEM0 835 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 ARMC5Q96C12 935 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 SYNRGQ9UMZ2 1314 aa11.53□□□□□ -0.56
CLPTM1-207ENST00000587537 A0A087X0B3 334 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 PVALEFA0A1B0GWK0 134 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 H3BRB1 525 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 ADAMTS4O75173 837 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 C6orf222P0C671 652 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 GNAT1P11488 350 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 GUCY2CP25092 1073 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 POSTNQ15063 836 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 GNASQ5JWF2 1037 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 RBM43Q6ZSC3 357 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 TRIML1Q8N9V2 468 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 COPS5Q92905 334 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 PAGE5Q96GU1 130 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 UIMC1Q96RL1 719 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 C7orf25Q9BPX7 421 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 C17orf75Q9HAS0 396 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 PAK6Q9NQU5 681 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 BLOC1S4Q9NUP1 217 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 SERTAD1Q9UHV2 236 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 ODF2LQ9ULJ1 636 aa11.52□□□□□ -0.57
CLPTM1-207ENST00000587537 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 ARID2Q68CP9 1835 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 MAGEB2O15479 319 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 ADCY6O43306 1168 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 CAVIN2O95810 425 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 PPP1R2P41236 205 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 RARRES1P49788 294 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 SLC12A3P55017 1021 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms