RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 PLCB4Q15147 1175 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 NAALADL2Q58DX5 795 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
NPC1-205ENST00000587163 POP1Q99575 1024 aaKnown RBP18.7■□□□□ 0.58
NPC1-205ENST00000587163 FTHL17Q9BXU8 183 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 TMX1Q9H3N1 280 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 KCNH7Q9NS40 1196 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 SLC9A2Q9UBY0 812 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 TRPC6Q9Y210 931 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 PCDHGC5Q9Y5F6 944 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 IGSF9BQ9UPX0 1349 aa18.7■□□□□ 0.58
NPC1-205ENST00000587163 EYA4O95677 639 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 ARP10275 920 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 MCM5P33992 734 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 TMTC2Q8N394 836 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 EFHBQ8N7U6 833 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 POF1BQ8WVV4 589 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 TMEM87BQ96K49 555 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 LRRC2Q9BYS8 371 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 CELF4Q9BZC1 486 aaKnown RBP18.69■□□□□ 0.58
NPC1-205ENST00000587163 KCNH6Q9H252 994 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 AZI2Q9H6S1 392 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 ZNF318Q5VUA4 2279 aa18.69■□□□□ 0.58
NPC1-205ENST00000587163 GLP2RO95838 553 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 RPLP2P05387 115 aaKnown RBP18.68■□□□□ 0.58
NPC1-205ENST00000587163 CALM1P0DP23 149 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 CALM2P0DP24 149 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 CALM3P0DP25 149 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 SCG2P13521 617 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 LIFRP42702 1097 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 NRIP1P48552 1158 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 ACTR2P61160 394 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 PAK2Q13177 524 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 TMEM266Q2M3C6 531 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 PLPPR4Q7Z2D5 763 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 HEATR3Q7Z4Q2 680 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 RBM23Q86U06 439 aaKnown RBP18.68■□□□□ 0.58
NPC1-205ENST00000587163 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 EDAQ92838 391 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 PGBD1Q96JS3 809 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 TECTAO75443 2155 aa18.68■□□□□ 0.58
NPC1-205ENST00000587163 M0QZ92 97 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 MGEA5O60502 916 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 IBSPP21815 317 aaPredicted RBP18.67■□□□□ 0.58
NPC1-205ENST00000587163 STAT5BP51692 787 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 ITGB3BPQ13352 177 aaPredicted RBP18.67■□□□□ 0.58
NPC1-205ENST00000587163 TYW1BQ6NUM6 668 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 MTHFD1LQ6UB35 978 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 SMRP1Q8NCR6 262 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 MFSD14AQ96MC6 490 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 LSG1Q9H089 658 aaKnown RBP18.67■□□□□ 0.58
NPC1-205ENST00000587163 CDHR5Q9HBB8 845 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 BARX2Q9UMQ3 279 aaPredicted RBP18.67■□□□□ 0.58
NPC1-205ENST00000587163 NFASCO94856 1347 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
NPC1-205ENST00000587163 SLC27A2O14975 620 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 KRT76Q01546 638 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 COASYQ13057 564 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 PPP2R3CQ969Q6 453 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 AGO4Q9HCK5 861 aaKnown RBP18.66■□□□□ 0.58
NPC1-205ENST00000587163 LRFN2Q9ULH4 789 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 KDM3AQ9Y4C1 1321 aa18.66■□□□□ 0.58
NPC1-205ENST00000587163 SMIM35A0A1B0GVV1 85 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 LOC730098B7Z3J9 87 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 ATG7O95352 703 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 KLRC1P26715 233 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 SARSP49591 514 aaKnown RBP18.65■□□□□ 0.58
NPC1-205ENST00000587163 RBM10P98175 930 aaKnown RBP18.65■□□□□ 0.58
NPC1-205ENST00000587163 NFX1Q12986 1120 aaKnown RBP18.65■□□□□ 0.58
NPC1-205ENST00000587163 NME8Q8N427 588 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
NPC1-205ENST00000587163 PHOX2BQ99453 314 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 ERVK-5Q9HDB9 667 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 HCSTQ9UBK5 93 aa18.65■□□□□ 0.58
NPC1-205ENST00000587163 NOC2LQ9Y3T9 749 aaKnown RBP18.65■□□□□ 0.58
NPC1-205ENST00000587163 IGKV6D-21A0A0A0MT36 114 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 PER2O15055 1255 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 CCNE2O96020 404 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 FAM102BQ5T8I3 360 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 IER5LQ5T953 404 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 MICU3Q86XE3 530 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 KIAA0319LQ8IZA0 1049 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 VN1R2Q8NFZ6 395 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 TMEM40Q8WWA1 233 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 RIC8AQ9NPQ8 531 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 GINS2Q9Y248 185 aa18.64■□□□□ 0.57
NPC1-205ENST00000587163 USP15Q9Y4E8 981 aaPredicted RBP18.64■□□□□ 0.57
NPC1-205ENST00000587163 MEIS1O00470 390 aa18.63■□□□□ 0.57
NPC1-205ENST00000587163 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
NPC1-205ENST00000587163 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
NPC1-205ENST00000587163 TRIM67Q6ZTA4 783 aa18.63■□□□□ 0.57
NPC1-205ENST00000587163 BMP8AQ7Z5Y6 402 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms