RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ARIH1Q9Y4X5 557 aaPredicted RBP13.3□□□□□ -0.28
LIG3-207ENST00000586119 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
LIG3-207ENST00000586119 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 DDX39AO00148 427 aaKnown RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 DCXO43602 365 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 CCNE2O96020 404 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 CALM1P0DP23 149 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 CALM2P0DP24 149 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 CALM3P0DP25 149 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 ALADP13716 330 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 STAT5BP51692 787 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 FUT2Q10981 343 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 ADAM15Q13444 863 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 ADHFE1Q8IWW8 467 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 CELF4Q9BZC1 486 aaKnown RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 AGO4Q9HCK5 861 aaKnown RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 HCSTQ9UBK5 93 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 PCDHA2Q9Y5H9 948 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 CNTNAP5Q8WYK1 1306 aa13.29□□□□□ -0.28
LIG3-207ENST00000586119 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
LIG3-207ENST00000586119 MAFGO15525 162 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 ATP4AP20648 1035 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 KLRC1P26715 233 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 NAPAP54920 295 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 RBM10P98175 930 aaKnown RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 EXOSC10Q01780 885 aaKnown RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 IER5Q5VY09 327 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 PLPPR4Q7Z2D5 763 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 RBM23Q86U06 439 aaKnown RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 POF1BQ8WVV4 589 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 PPP1R16BQ96T49 567 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 ANO3Q9BYT9 981 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 LMAN2LQ9H0V9 348 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
LIG3-207ENST00000586119 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 GINS2Q9Y248 185 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 TECTAO75443 2155 aa13.28□□□□□ -0.28
LIG3-207ENST00000586119 MYH9P35579 1960 aaKnown RBP13.27□□□□□ -0.28
LIG3-207ENST00000586119 SMCO2A6NFE2 343 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 STXBP3O00186 592 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 MEIS1O00470 390 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 ATG7O95352 703 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 MMP1P03956 469 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 CDC27P30260 824 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 FAM102BQ5T8I3 360 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 JAKMIP3Q5VZ66 844 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 APOA5Q6Q788 366 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
LIG3-207ENST00000586119 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 CMTR2Q8IYT2 770 aaKnown RBP13.27□□□□□ -0.29
LIG3-207ENST00000586119 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 CLEC1BQ9P126 229 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 NOC2LQ9Y3T9 749 aaKnown RBP13.27□□□□□ -0.29
LIG3-207ENST00000586119 RWDD3Q9Y3V2 267 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 NFASCO94856 1347 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 IGSF9BQ9UPX0 1349 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 WDR81Q562E7 1941 aa13.27□□□□□ -0.29
LIG3-207ENST00000586119 IGKV6D-21A0A0A0MT36 114 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 FAM86B1E9PN63 330 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 PER2O15055 1255 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 DHX15O43143 795 aaKnown RBP13.26□□□□□ -0.29
LIG3-207ENST00000586119 FAM86B2P0C5J1 330 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 SCG2P13521 617 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CPA1P15085 419 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 NRIP1P48552 1158 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
LIG3-207ENST00000586119 KRT76Q01546 638 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 PAK2Q13177 524 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CSPP1Q1MSJ5 1256 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CEP55Q53EZ4 464 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 ABHD15Q6UXT9 468 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 HFE2Q6ZVN8 426 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 RNF135Q8IUD6 432 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CCDC60Q8IWA6 550 aaPredicted RBP13.26□□□□□ -0.29
LIG3-207ENST00000586119 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 NEK1Q96PY6 1258 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 ERVK-5Q9HDB9 667 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 PRKAG3Q9UGI9 489 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 CD207Q9UJ71 328 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 TRIOO75962 3097 aa13.26□□□□□ -0.29
LIG3-207ENST00000586119 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms