RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 C7orf25Q9BPX7 421 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 LRRC27Q9C0I9 530 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
SS18-226ENST00000585241 ANKEF1Q9NU02 776 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 KIAA1468Q9P260 1216 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 PTCH2Q9Y6C5 1203 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 PCNTO95613 3336 aa18.02■□□□□ 0.48
SS18-226ENST00000585241 MYH9P35579 1960 aaKnown RBP18.01■□□□□ 0.47
SS18-226ENST00000585241 BACH1O14867 736 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 PPFIA4O75335 1185 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 MMP3P08254 477 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 PRR29P0C7W0 189 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 ATP4AP20648 1035 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 YWHABP31946 246 aaKnown RBP18.01■□□□□ 0.47
SS18-226ENST00000585241 GRK4P32298 578 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 SARSP49591 514 aaKnown RBP18.01■□□□□ 0.47
SS18-226ENST00000585241 SLC26A2P50443 739 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 STAT5BP51692 787 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 AMPD3Q01432 767 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 PNOCQ13519 176 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 ANP32EQ9BTT0 268 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 TRIM9Q9C026 710 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 PTPN22Q9Y2R2 807 aa18.01■□□□□ 0.47
SS18-226ENST00000585241 DYNC1LI2O43237 492 aaPredicted RBP18■□□□□ 0.47
SS18-226ENST00000585241 CYP11B2P19099 503 aa18■□□□□ 0.47
SS18-226ENST00000585241 AFMP43652 599 aa18■□□□□ 0.47
SS18-226ENST00000585241 RARRES1P49788 294 aa18■□□□□ 0.47
SS18-226ENST00000585241 GJA9P57773 515 aa18■□□□□ 0.47
SS18-226ENST00000585241 ZNF445P59923 1031 aa18■□□□□ 0.47
SS18-226ENST00000585241 PRKCEQ02156 737 aa18■□□□□ 0.47
SS18-226ENST00000585241 XKR3Q5GH77 459 aa18■□□□□ 0.47
SS18-226ENST00000585241 ANO5Q75V66 913 aa18■□□□□ 0.47
SS18-226ENST00000585241 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
SS18-226ENST00000585241 FAM167AQ96KS9 214 aa18■□□□□ 0.47
SS18-226ENST00000585241 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
SS18-226ENST00000585241 SMARCAD1Q9H4L7 1026 aa18■□□□□ 0.47
SS18-226ENST00000585241 AZI2Q9H6S1 392 aa18■□□□□ 0.47
SS18-226ENST00000585241 KCND2Q9NZV8 630 aa18■□□□□ 0.47
SS18-226ENST00000585241 CEP350Q5VT06 3117 aa18■□□□□ 0.47
SS18-226ENST00000585241 MYMKA6NI61 221 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 ZBTB39O15060 712 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 OATP04181 439 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 INHAP05111 366 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 LGALS2P05162 132 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 CCND3P30281 292 aaPredicted RBP17.99■□□□□ 0.47
SS18-226ENST00000585241 CUL4BQ13620 913 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 STAMQ92783 540 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 LENG1Q96BZ8 264 aaPredicted RBP17.99■□□□□ 0.47
SS18-226ENST00000585241 C16orf70Q9BSU1 422 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 FUCA2Q9BTY2 467 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 NIFKQ9BYG3 293 aaKnown RBP17.99■□□□□ 0.47
SS18-226ENST00000585241 PPME1Q9Y570 386 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 PCDHA5Q9Y5H7 936 aa17.99■□□□□ 0.47
SS18-226ENST00000585241 A0A087WWV3 80 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 SYCE3A1L190 88 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 KLRC4O43908 158 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 SMC2O95347 1197 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 CPT1AP50416 773 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 DGKDQ16760 1214 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 ARSHQ5FYA8 562 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
SS18-226ENST00000585241 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 OTUD6AQ7L8S5 288 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 GPBP1Q86WP2 473 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 DNAJC19Q96DA6 116 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 GSDMAQ96QA5 445 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 AP5M1Q9H0R1 490 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
SS18-226ENST00000585241 PVALEFA0A1B0GWK0 134 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 ARHGEF35A5YM69 484 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 MSCO60682 206 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 ADAMTS4O75173 837 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 RARBP10826 455 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 GUCY2CP25092 1073 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 CASP1P29466 404 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 KCNB1Q14721 858 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 TARBP2Q15633 366 aaKnown RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 BRDTQ58F21 947 aaPredicted RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 RINT1Q6NUQ1 792 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 TRIML1Q8N9V2 468 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 ATP8B4Q8TF62 1192 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 DDX12PQ92771 950 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 GLG1Q92896 1179 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 RUSC1Q9BVN2 902 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 GZF1Q9H116 711 aaPredicted RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 ERAP1Q9NZ08 941 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 DDX20Q9UHI6 824 aaKnown RBP17.97■□□□□ 0.47
SS18-226ENST00000585241 ARID2Q68CP9 1835 aa17.97■□□□□ 0.47
SS18-226ENST00000585241 FRMD3A2A2Y4 597 aa17.96■□□□□ 0.47
SS18-226ENST00000585241 F2P00734 622 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms