RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RNASE9P60153 205 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EXOC3L4Q17RC7 722 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EMC10Q5UCC4 262 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 LRRC57Q8N9N7 239 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EIF1ADQ8N9N8 165 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ERMNQ8TAM6 284 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 REEP2Q9BRK0 252 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 NAGPAQ9UK23 515 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 DNM3Q9UQ16 869 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KCNK3O14649 394 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KIF4AO95239 1232 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.082e-7■■■□□ 15.2
CDK5RAP3-237ENST00000585163 IFI16Q16666 785 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 Q4G0T1 1027 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PRR16Q569H4 304 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SFR1Q86XK3 245 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 C1orf131Q8NDD1 294 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 DCAF4Q8WV16 495 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PBKQ96KB5 322 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 P2RX7Q99572 595 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SLURP2P0DP57 97 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ANXA13P27216 316 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SCNN1DP51172 638 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 GUCY2FP51841 1108 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 NFIAQ12857 509 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TRADDQ15628 312 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KCTD16Q68DU8 428 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TTC19Q6DKK2 380 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SH2D3CQ8N5H7 860 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ACTRT1Q8TDG2 376 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 LENG9Q96B70 501 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ATP8B3O60423 1300 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 A0A087WUV0 522 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MEIS1O00470 390 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PPEF1O14829 653 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CALUO43852 315 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 AKAP3O75969 853 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EEF2P13639 858 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MMP14P50281 582 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EPHA7Q15375 998 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 BMT2Q1RMZ1 405 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MCTP2Q6DN12 878 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ALKBH5Q6P6C2 394 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KDM7AQ6ZMT4 941 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 NENFQ9UMX5 172 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 HSPA9P38646 679 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SLFN13Q68D06 897 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PACS2Q86VP3 889 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KLHL7Q8IXQ5 586 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ISCUQ9H1K1 167 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TAF1DQ9H5J8 278 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 METTL14Q9HCE5 456 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CLGNO14967 610 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RAD21O60216 631 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FLOT1O75955 427 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CPP00450 1065 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ZBTB48P10074 688 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 DDR1Q08345 913 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PDCLQ13371 301 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TTC31Q49AM3 519 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TADA2BQ86TJ2 420 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CALR3Q96L12 384 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ZC3H12CQ9C0D7 883 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 STK24Q9Y6E0 443 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM86B1E9PN63 330 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SLC16A3O15427 465 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NR3C1P04150 777 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FAM86B2P0C5J1 330 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NOP2P46087 812 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 JAM2P57087 298 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 DCAF17Q5H9S7 520 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SLC35C1Q96A29 364 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FAM20AQ96MK3 541 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GOLPH3Q9H4A6 298 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SIX2Q9NPC8 291 aa15.52■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ASTN1O14525 1302 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ZEB2O60315 1214 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ECHS1P30084 290 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ATP1A2P50993 1020 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ERVK-9P63128 1117 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CUL1Q13616 776 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TPCN2Q8NHX9 752 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 AMNQ9BXJ7 453 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 EFCC1Q9HA90 598 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms