RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 INSL6Q9Y581 213 aa14□□□□□ -0.17
SS18-225ENST00000585121 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
SS18-225ENST00000585121 CDY2AQ9Y6F7 541 aa14□□□□□ -0.17
SS18-225ENST00000585121 KAT6AQ92794 2004 aa14□□□□□ -0.17
SS18-225ENST00000585121 A0A0C4DFX4 3053 aa14□□□□□ -0.17
SS18-225ENST00000585121 SMIM35A0A1B0GVV1 85 aa14□□□□□ -0.17
SS18-225ENST00000585121 MSH4O15457 936 aa14□□□□□ -0.17
SS18-225ENST00000585121 TAP1Q03518 808 aa14□□□□□ -0.17
SS18-225ENST00000585121 Q4G0T1 1027 aa14□□□□□ -0.17
SS18-225ENST00000585121 LRCH2Q5VUJ6 765 aa14□□□□□ -0.17
SS18-225ENST00000585121 MTHFD1LQ6UB35 978 aa14□□□□□ -0.17
SS18-225ENST00000585121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14□□□□□ -0.17
SS18-225ENST00000585121 TMCO2Q7Z6W1 182 aaPredicted RBP14□□□□□ -0.17
SS18-225ENST00000585121 TRAPPC12Q8WVT3 735 aa14□□□□□ -0.17
SS18-225ENST00000585121 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
SS18-225ENST00000585121 PPM1EQ8WY54 764 aa14□□□□□ -0.17
SS18-225ENST00000585121 ARNTL2Q8WYA1 636 aa14□□□□□ -0.17
SS18-225ENST00000585121 FAM167AQ96KS9 214 aa14□□□□□ -0.17
SS18-225ENST00000585121 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
SS18-225ENST00000585121 CERS4Q9HA82 394 aa14□□□□□ -0.17
SS18-225ENST00000585121 COL1A2P08123 1366 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 CHD9Q3L8U1 2897 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 CYP3A7-CYP3A51PA0A087WV96 503 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 CYP3A7P24462 503 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 KLRC1P26715 233 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 SFNP31947 248 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 JAK3P52333 1124 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 MGAT3Q09327 533 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 USP38Q8NB14 1042 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 LENG9Q96B70 501 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 NAP1L4Q99733 375 aaKnown RBP13.99□□□□□ -0.17
SS18-225ENST00000585121 DISC1Q9NRI5 854 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 GABBR1Q9UBS5 961 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 CEP131Q9UPN4 1083 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
SS18-225ENST00000585121 TRPV2Q9Y5S1 764 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
SS18-225ENST00000585121 M0R2N6 131 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 CHMP2AO43633 222 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 UPP2O95045 317 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 SEC24BO95487 1268 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 ADGRE1Q14246 886 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 LPIN1Q14693 890 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 ME3Q16798 604 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 INF2Q27J81 1249 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 TSHZ1Q6ZSZ6 1077 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 TRMT1LQ7Z2T5 733 aaKnown RBP13.98□□□□□ -0.17
SS18-225ENST00000585121 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 TGS1Q96RS0 853 aaKnown RBP13.98□□□□□ -0.17
SS18-225ENST00000585121 YME1L1Q96TA2 773 aa13.98□□□□□ -0.17
SS18-225ENST00000585121 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
SS18-225ENST00000585121 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
SS18-225ENST00000585121 MARCH6O60337 910 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 TDP2O95551 362 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 TRIM29Q14134 588 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 NPY5RQ15761 445 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 MICALL1Q8N3F8 863 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 CELF4Q9BZC1 486 aaKnown RBP13.97□□□□□ -0.17
SS18-225ENST00000585121 OSBPL7Q9BZF2 842 aa13.97□□□□□ -0.17
SS18-225ENST00000585121 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 MAGEB2O15479 319 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 EDIL3O43854 480 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 CTDNEP1O95476 244 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.17
SS18-225ENST00000585121 ATP4AP20648 1035 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 TMOD1P28289 359 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 KRT2P35908 639 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 TMEM62Q0P6H9 643 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 PAK2Q13177 524 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
SS18-225ENST00000585121 CCDC85BQ15834 202 aaPredicted RBP13.96□□□□□ -0.17
SS18-225ENST00000585121 ODR4Q5SWX8 454 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
SS18-225ENST00000585121 NEK8Q86SG6 692 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 UNC45AQ9H3U1 944 aa13.96□□□□□ -0.17
SS18-225ENST00000585121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
SS18-225ENST00000585121 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 RFXAPO00287 272 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 DLL1O00548 723 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 PSMD10O75832 226 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 OATP04181 439 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 CD52P31358 61 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 ERVK-21P61565 698 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 HTRA4P83105 476 aaPredicted RBP13.95□□□□□ -0.18
SS18-225ENST00000585121 PIK3AP1Q6ZUJ8 805 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 MBOAT7Q96N66 472 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 SAMD11Q96NU1 681 aa13.95□□□□□ -0.18
SS18-225ENST00000585121 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms