RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TMEM184AQ6ZMB5 413 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 RSPH3Q86UC2 560 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 MICAL1Q8TDZ2 1067 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 PIBF1Q8WXW3 757 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 PCYT2Q99447 389 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 UBAC1Q9BSL1 405 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 IL25Q9H293 177 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 FRYLO94915 3013 aa20.86■□□□□ 0.93
TOP3A-220ENST00000585031 FSCN2O14926 492 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 SCG2P13521 617 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 INSRRP14616 1297 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 IBSPP21815 317 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-220ENST00000585031 ERICH6BQ5W0A0 696 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 PCNX4Q63HM2 1172 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 TRAPPC12Q8WVT3 735 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 NKD2Q969F2 451 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-220ENST00000585031 KRT23Q9C075 422 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 EVPLQ92817 2033 aa20.85■□□□□ 0.93
TOP3A-220ENST00000585031 MEIS2O14770 477 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 MFAP1P55081 439 aaKnown RBP20.84■□□□□ 0.93
TOP3A-220ENST00000585031 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 TMEM266Q2M3C6 531 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 FAM102BQ5T8I3 360 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 ADSSL1Q8N142 457 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 KREMEN2Q8NCW0 462 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 SEPT1Q8WYJ6 367 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 NEK1Q96PY6 1258 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 CDCA3Q99618 268 aaPredicted RBP20.84■□□□□ 0.93
TOP3A-220ENST00000585031 FTHL17Q9BXU8 183 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 ERAP1Q9NZ08 941 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 SQORQ9Y6N5 450 aa20.84■□□□□ 0.93
TOP3A-220ENST00000585031 IGSF9BQ9UPX0 1349 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 FSD2A1L4K1 749 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 FGF18O76093 207 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 BRD1O95696 1058 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 STAG3L1P0CL83 205 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 ITGB5P18084 799 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 UBE3AQ05086 875 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 ANKRD54Q6NXT1 300 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 FRMD5Q7Z6J6 570 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 UBALD2Q8IYN6 164 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 DSCC1Q9BVC3 393 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 LNPKQ9C0E8 428 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 PKD2L1Q9P0L9 805 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 TRPV2Q9Y5S1 764 aa20.83■□□□□ 0.93
TOP3A-220ENST00000585031 EP300Q09472 2414 aaPredicted RBP20.83■□□□□ 0.92
TOP3A-220ENST00000585031 TECP42680 631 aa20.82■□□□□ 0.92
TOP3A-220ENST00000585031 TROAPQ12815 778 aa20.82■□□□□ 0.92
TOP3A-220ENST00000585031 IMMTQ16891 758 aaKnown RBP20.82■□□□□ 0.92
TOP3A-220ENST00000585031 GLG1Q92896 1179 aa20.82■□□□□ 0.92
TOP3A-220ENST00000585031 CDHR5Q9HBB8 845 aa20.82■□□□□ 0.92
TOP3A-220ENST00000585031 CACNA1BQ00975 2339 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 HIDE1A8MVS5 230 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 PAK2Q13177 524 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 IER5Q5VY09 327 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 ASTLQ6HA08 431 aaPredicted RBP20.81■□□□□ 0.92
TOP3A-220ENST00000585031 LLGL2Q6P1M3 1020 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 ZBTB33Q86T24 672 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 COLGALT1Q8NBJ5 622 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 CELF4Q9BZC1 486 aaKnown RBP20.81■□□□□ 0.92
TOP3A-220ENST00000585031 CWH43Q9H720 699 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 TYW1Q9NV66 732 aaKnown RBP20.81■□□□□ 0.92
TOP3A-220ENST00000585031 TMEM260Q9NX78 707 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
TOP3A-220ENST00000585031 SORCS3Q9UPU3 1222 aa20.81■□□□□ 0.92
TOP3A-220ENST00000585031 TBKBP1A7MCY6 615 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 SARSP49591 514 aaKnown RBP20.8■□□□□ 0.92
TOP3A-220ENST00000585031 PLPP4Q5VZY2 271 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 MCTP2Q6DN12 878 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 PDE12Q6L8Q7 609 aaKnown RBP20.8■□□□□ 0.92
TOP3A-220ENST00000585031 NLRX1Q86UT6 975 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 SMARCAD1Q9H4L7 1026 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 LRFN2Q9ULH4 789 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 PCDHB12Q9Y5F1 795 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 TAF6LQ9Y6J9 622 aa20.8■□□□□ 0.92
TOP3A-220ENST00000585031 RRN3P2A6NIE6 340 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 C2CD4DB7Z1M9 353 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 CLCN5P51795 746 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 TRAF1Q13077 416 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 MTMR3Q13615 1198 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 SPOUT1Q5T280 376 aaKnown RBP20.79■□□□□ 0.92
TOP3A-220ENST00000585031 XRRA1Q6P2D8 792 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 GIMAP8Q8ND71 665 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-220ENST00000585031 SMARCC2Q8TAQ2 1214 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 FEZF2Q8TBJ5 459 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 GPRASP2Q96D09 838 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 POMKQ9H5K3 350 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 ERVK-5Q9HDB9 667 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 NOC2LQ9Y3T9 749 aaKnown RBP20.79■□□□□ 0.92
TOP3A-220ENST00000585031 PCDHA2Q9Y5H9 948 aa20.79■□□□□ 0.92
TOP3A-220ENST00000585031 PIK3CDO00329 1044 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 HOXB8P17481 243 aaPredicted RBP20.78■□□□□ 0.92
TOP3A-220ENST00000585031 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 THNSL1Q8IYQ7 743 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 TMEM40Q8WWA1 233 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
TOP3A-220ENST00000585031 NR2E1Q9Y466 385 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms