RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 SAMD11Q96NU1 681 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 MXRA8Q9BRK3 442 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 RC3H2Q9HBD1 1191 aaKnown RBP12.38□□□□□ -0.43
PGAP3-209ENST00000584620 KCNH7Q9NS40 1196 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
PGAP3-209ENST00000584620 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
PGAP3-209ENST00000584620 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 ENPP3O14638 875 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 LINC01565O15544 149 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 TBX10O75333 385 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 ARP10275 920 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 INSRRP14616 1297 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 ITGB3BPQ13352 177 aaPredicted RBP12.37□□□□□ -0.43
PGAP3-209ENST00000584620 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
PGAP3-209ENST00000584620 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 FBXO47Q5MNV8 452 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 LINC01599Q8WXQ3 324 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 GLG1Q92896 1179 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
PGAP3-209ENST00000584620 JPH1Q9HDC5 661 aaPredicted RBP12.37□□□□□ -0.43
PGAP3-209ENST00000584620 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
PGAP3-209ENST00000584620 NLRC5Q86WI3 1866 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 PRR23AA6NEV1 266 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 NCK2O43639 380 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 CDC27P30260 824 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 ACTR2P61160 394 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 IGBP1P78318 339 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 RTN4RL1Q86UN2 441 aaPredicted RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 CRIPAKQ8N1N5 446 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 ZNF689Q96CS4 500 aaPredicted RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 IRF2BPLQ9H1B7 796 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 SLC9A2Q9UBY0 812 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 CD207Q9UJ71 328 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 RIF1Q5UIP0 2472 aaKnown RBP12.36□□□□□ -0.43
PGAP3-209ENST00000584620 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 DOCK5Q9H7D0 1870 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 NFASCO94856 1347 aa12.36□□□□□ -0.43
PGAP3-209ENST00000584620 RRN3P2A6NIE6 340 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 C5orf67F2Z3F1 127 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 MEIS1O00470 390 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 ZBTB43O43298 467 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 ATG7O95352 703 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 CD52P31358 61 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 BMPR1AP36894 532 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 SREBF1P36956 1147 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 NAPAP54920 295 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
PGAP3-209ENST00000584620 RTN1Q16799 776 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 CEP55Q53EZ4 464 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 FIBCD1Q8N539 461 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 TRAPPC12Q8WVT3 735 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
PGAP3-209ENST00000584620 ANO3Q9BYT9 981 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
PGAP3-209ENST00000584620 AGO4Q9HCK5 861 aaKnown RBP12.35□□□□□ -0.43
PGAP3-209ENST00000584620 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 ADGRA3Q8IWK6 1321 aa12.35□□□□□ -0.43
PGAP3-209ENST00000584620 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 IGKV6D-21A0A0A0MT36 114 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 GRM6O15303 877 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 CCNE2O96020 404 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
PGAP3-209ENST00000584620 PDGFBP01127 241 aaPredicted RBP12.34□□□□□ -0.43
PGAP3-209ENST00000584620 CTNNB1P35222 781 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 ADCY7P51828 1080 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 ASIC4Q96FT7 647 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 PCDHA2Q9Y5H9 948 aa12.34□□□□□ -0.43
PGAP3-209ENST00000584620 KLF18A0A0U1RQI7 1052 aa12.33□□□□□ -0.44
PGAP3-209ENST00000584620 MED19A0JLT2 244 aaPredicted RBP12.33□□□□□ -0.44
PGAP3-209ENST00000584620 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
PGAP3-209ENST00000584620 GOLGA8BA8MQT2 603 aa12.33□□□□□ -0.44
PGAP3-209ENST00000584620 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
PGAP3-209ENST00000584620 FAM86B1E9PN63 330 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms