RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 WDR59Q6PJI9 974 aa12.36□□□□□ -0.43
TOP3A-217ENST00000584582 NUP188Q5SRE5 1749 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 TISP43B9A030 160 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 MEIS2O14770 477 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 ZSCAN20P17040 1043 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-217ENST00000584582 INPP5BP32019 993 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 HMGCS2P54868 508 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 BRD3Q15059 726 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 CFAP221Q4G0U5 840 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SEPT14Q6ZU15 432 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 GLYCTKQ8IVS8 523 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 CCDC170Q8IYT3 715 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 CCDC151A5D8V7 595 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SOX10P56693 466 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 PSMD2Q13200 908 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 FAM84AQ96KN4 292 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 WDR11Q9BZH6 1224 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 EPB41L5Q9HCM4 733 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 UBE2TQ9NPD8 197 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-217ENST00000584582 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 A0A087X0T9 212 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 HSF2BPO75031 334 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 H2AFZP0C0S5 128 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 FAM228BP0C875 321 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 TERF2Q15554 542 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 H2AFVQ71UI9 128 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 CRYBG1Q9Y4K1 1723 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
TOP3A-217ENST00000584582 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ATP2C2O75185 946 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 GNA14O95837 355 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 VPS41P49754 854 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 CXCL9Q07325 125 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 MTMR1Q13613 665 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 CYFIP1Q7L576 1253 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 CEP170P1Q96L14 293 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ANKFY1Q9P2R3 1169 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 TNNI1P19237 187 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 KLRC1P26715 233 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ANKRD35Q8N283 1001 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 UBLCP1Q8WVY7 318 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 REXO2Q9Y3B8 237 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 JRKLQ9Y4A0 524 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 SPOPO43791 374 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 AKAP3O75969 853 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 SASH3O75995 380 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 CDR1P51861 262 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ZNF211Q13398 564 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 MTERF2Q49AM1 385 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 PDXDC1Q6P996 788 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 POMGNT1Q8WZA1 660 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 TSPYL1Q9H0U9 437 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-217ENST00000584582 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
TOP3A-217ENST00000584582 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 HNRNPDLO14979 420 aaKnown RBP12.33□□□□□ -0.44
TOP3A-217ENST00000584582 HIP1RO75146 1068 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MCM3P25205 808 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 PLA2G4AP47712 749 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 CFAP58Q5T655 872 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 SELENOOQ9BVL4 669 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 DNAJC12Q9UKB3 198 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 PEX10O60683 326 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 HEXIM1O94992 359 aaKnown RBP12.33□□□□□ -0.44
TOP3A-217ENST00000584582 SERPING1P05155 500 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MARK3P27448 753 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 RPA1P27694 616 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 PRELPP51888 382 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 SMTNP53814 917 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MYL7Q01449 175 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 DMTNQ08495 405 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 GIT2Q14161 759 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MESDQ14696 234 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MIIPQ5JXC2 388 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms