RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 BATF3Q9NR55 127 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ZBED1O96006 694 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CDR2Q01850 454 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ANO5Q75V66 913 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 EXOC8Q8IYI6 725 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 FBXL13Q8NEE6 735 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
RNF43-208ENST00000584437 TTC17Q96AE7 1141 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 SLITRK6Q9H5Y7 841 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ZNF233A6NK53 670 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CDC25AP30304 524 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
RNF43-208ENST00000584437 TMTC4Q5T4D3 741 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 KLC3Q6P597 504 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
RNF43-208ENST00000584437 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 GFM2Q969S9 779 aaKnown RBP14.01□□□□□ -0.17
RNF43-208ENST00000584437 FAM8A1Q9UBU6 413 aa14.01□□□□□ -0.17
RNF43-208ENST00000584437 CYP2C19P33261 490 aa14□□□□□ -0.17
RNF43-208ENST00000584437 SURF1Q15526 300 aa14□□□□□ -0.17
RNF43-208ENST00000584437 ABCB5Q2M3G0 1257 aa14□□□□□ -0.17
RNF43-208ENST00000584437 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
RNF43-208ENST00000584437 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
RNF43-208ENST00000584437 ECT2Q9H8V3 914 aa14□□□□□ -0.17
RNF43-208ENST00000584437 ETNK1Q9HBU6 452 aa14□□□□□ -0.17
RNF43-208ENST00000584437 PDHA1P08559 390 aa14□□□□□ -0.17
RNF43-208ENST00000584437 CHRNA3P32297 505 aa14□□□□□ -0.17
RNF43-208ENST00000584437 TAF1BQ53T94 588 aaPredicted RBP14□□□□□ -0.17
RNF43-208ENST00000584437 C16orf87Q6PH81 154 aa14□□□□□ -0.17
RNF43-208ENST00000584437 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
RNF43-208ENST00000584437 FAM149B1Q96BN6 582 aa14□□□□□ -0.17
RNF43-208ENST00000584437 ANO3Q9BYT9 981 aa14□□□□□ -0.17
RNF43-208ENST00000584437 NDE1Q9NXR1 346 aa14□□□□□ -0.17
RNF43-208ENST00000584437 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
RNF43-208ENST00000584437 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
RNF43-208ENST00000584437 SYNJ2BP-COX16A0A087WUM0 186 aa14□□□□□ -0.17
RNF43-208ENST00000584437 MEFVO15553 781 aaPredicted RBP14□□□□□ -0.17
RNF43-208ENST00000584437 HNRNPCL1O60812 293 aaKnown RBP14□□□□□ -0.17
RNF43-208ENST00000584437 OCRLQ01968 901 aa14□□□□□ -0.17
RNF43-208ENST00000584437 TTC1Q99614 292 aa14□□□□□ -0.17
RNF43-208ENST00000584437 KLC2Q9H0B6 622 aa14□□□□□ -0.17
RNF43-208ENST00000584437 PCIF1Q9H4Z3 704 aa14□□□□□ -0.17
RNF43-208ENST00000584437 COX16Q9P0S2 106 aa14□□□□□ -0.17
RNF43-208ENST00000584437 GDAQ9Y2T3 454 aa14□□□□□ -0.17
RNF43-208ENST00000584437 PPME1Q9Y570 386 aa14□□□□□ -0.17
RNF43-208ENST00000584437 ZBBXA8MT70 800 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 KPNA7A9QM74 516 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 LLGL1Q15334 1064 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 PIGSQ96S52 555 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.179e-8■■□□□ 13.1
RNF43-208ENST00000584437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.172e-11■■■□□ 15.2
RNF43-208ENST00000584437 SEPT9Q9UHD8 586 aaPredicted RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 NVLO15381 856 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 MAN1A2O60476 641 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 OSBPL1AQ9BXW6 950 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 TRIM33Q9UPN9 1127 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 ZNF804BA4D1E1 1349 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 TAC1P20366 129 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 ACAD11Q709F0 780 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 PSPC1Q8WXF1 523 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 DTNBP1Q96EV8 351 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 SLC5A4Q9NY91 659 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 PVALEFA0A1B0GWK0 134 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 USP27XA6NNY8 438 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 ZRANB2O95218 330 aaKnown RBP eCLIP13.99□□□□□ -0.17
RNF43-208ENST00000584437 BRAFP15056 766 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 GPC5P78333 572 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.99□□□□□ -0.17
RNF43-208ENST00000584437 VPS39Q96JC1 886 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 TGS1Q96RS0 853 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 SCHIP1Q9P0W5 487 aaPredicted RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 LRRC53A6NM62 1247 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 RAD23BP54727 409 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
RNF43-208ENST00000584437 CAPN11Q9UMQ6 739 aa13.99□□□□□ -0.17
RNF43-208ENST00000584437 STAT2P52630 851 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 ARFIP2P53365 341 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 DCAF15Q66K64 600 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 LCA5Q86VQ0 697 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 HIPK4Q8NE63 616 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 AIFM3Q96NN9 605 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 GOLPH3LQ9H4A5 285 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 SUN2Q9UH99 717 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 FIS1Q9Y3D6 152 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 A0A1W2PQC6 194 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 PPP1R37O75864 691 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 MRPS25P82663 173 aaKnown RBP13.98□□□□□ -0.17
RNF43-208ENST00000584437 SKA2Q8WVK7 121 aaPredicted RBP13.98□□□□□ -0.17
RNF43-208ENST00000584437 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 SPC25Q9HBM1 224 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 ZC4H2Q9NQZ6 224 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 RCAN1P53805 252 aa13.98□□□□□ -0.17
RNF43-208ENST00000584437 NAA30Q147X3 362 aaPredicted RBP13.98□□□□□ -0.17
RNF43-208ENST00000584437 MYLK4Q86YV6 388 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms