RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TBX3O15119 743 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 CHMP2AO43633 222 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 MARCH6O60337 910 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 CTSHP09668 335 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 DNAJB2P25686 324 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 IKBKEQ14164 716 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 ZNF484Q5JVG2 852 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 FAM26DQ5JW98 314 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 Q7L0L9 218 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 KIF3AQ9Y496 699 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 PCDHA2Q9Y5H9 948 aa30.66■■■□□ 2.5
SMARCD2-210ENST00000584400 FOSBP53539 338 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 MIER3Q7Z3K6 550 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 TNFRSF25Q93038 417 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 TIFAQ96CG3 184 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 PBX4Q9BYU1 374 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 UNC45AQ9H3U1 944 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 LAMA3Q16787 3333 aa30.65■■■□□ 2.5
SMARCD2-210ENST00000584400 SLC37A4O43826 429 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 BAG4O95429 457 aaKnown RBP30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 MBTPS1Q14703 1052 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 IER5Q5VY09 327 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 RUFY4Q6ZNE9 571 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 DNAJB3Q8WWF6 145 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 SEPT8Q92599 483 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 NRBP2Q9NSY0 501 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 MTMR10Q9NXD2 777 aa30.64■■■□□ 2.5
SMARCD2-210ENST00000584400 GRXCR1A8MXD5 290 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 M0QZ92 97 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 MTHFD1LQ6UB35 978 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 SLFN12Q8IYM2 578 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 NME8Q8N427 588 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 KCNMB3Q9NPA1 279 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 GTF3C3Q9Y5Q9 886 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 IGSF9BQ9UPX0 1349 aa30.63■■■□□ 2.49
SMARCD2-210ENST00000584400 SMIM35A0A1B0GVV1 85 aa30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 KIF28PB7ZC32 967 aa30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 PLEKHG4Q58EX7 1191 aa30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 EARS2Q5JPH6 523 aaKnown RBP30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 APBB2Q92870 758 aa30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 SEMA6BQ9H3T3 888 aa30.62■■■□□ 2.49
SMARCD2-210ENST00000584400 ATP4AP20648 1035 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 KLRC1P26715 233 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 DBF4BQ8NFT6 615 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 FBXO18Q8NFZ0 1043 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 TRAPPC12Q8WVT3 735 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 GJA10Q969M2 543 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 BACH2Q9BYV9 841 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 FAM49AQ9H0Q0 323 aaPredicted RBP30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 PCDHA11Q9Y5I1 949 aa30.61■■■□□ 2.49
SMARCD2-210ENST00000584400 OATP04181 439 aa30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 WDR5P61964 334 aaKnown RBP30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 GUCY1B3Q02153 619 aa30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 PPP2R5CQ13362 524 aa30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 GNL2Q13823 731 aaKnown RBP30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 B3GNT9Q6UX72 402 aa30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 TMX3Q96JJ7 454 aa30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 FOXP1Q9H334 677 aaPredicted RBP30.6■■■□□ 2.49
SMARCD2-210ENST00000584400 MAGEB2O15479 319 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 DKC1O60832 514 aaKnown RBP eCLIP30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 CHRNA1P02708 482 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 PBX2P40425 430 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 MRPS6P82932 125 aaKnown RBP30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 USP38Q8NB14 1042 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 FAM161BQ96MY7 647 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 SLC28A3Q9HAS3 691 aa30.59■■■□□ 2.49
SMARCD2-210ENST00000584400 FAM205CA6NFA0 338 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 MGAT3Q09327 533 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 TRMT1LQ7Z2T5 733 aaKnown RBP30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 HERC6Q8IVU3 1022 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 IFIH1Q9BYX4 1025 aaKnown RBP30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 ZNF576Q9H609 170 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 CDY2AQ9Y6F7 541 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 SQORQ9Y6N5 450 aa30.58■■■□□ 2.49
SMARCD2-210ENST00000584400 SCN5AQ14524 2016 aa30.57■■■□□ 2.49
SMARCD2-210ENST00000584400 TRIP12Q14669 1992 aaPredicted RBP30.57■■■□□ 2.48
SMARCD2-210ENST00000584400 PRKCEQ02156 737 aa30.57■■■□□ 2.48
SMARCD2-210ENST00000584400 POTEDQ86YR6 584 aa30.57■■■□□ 2.48
SMARCD2-210ENST00000584400 TTYH1Q9H313 450 aaPredicted RBP30.57■■■□□ 2.48
SMARCD2-210ENST00000584400 TRPV2Q9Y5S1 764 aa30.57■■■□□ 2.48
SMARCD2-210ENST00000584400 AMHP03971 560 aa30.56■■■□□ 2.48
SMARCD2-210ENST00000584400 RABGGTBP53611 331 aa30.56■■■□□ 2.48
SMARCD2-210ENST00000584400 XKR3Q5GH77 459 aa30.56■■■□□ 2.48
SMARCD2-210ENST00000584400 VAV3Q9UKW4 847 aa30.56■■■□□ 2.48
SMARCD2-210ENST00000584400 NEMFO60524 1076 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 TMOD1P28289 359 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 PSMC5P62195 406 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 CALCRLQ16602 461 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 FAM43BQ6ZT52 329 aaPredicted RBP30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 HAS1Q92839 578 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 ZBTB10Q96DT7 871 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 ZBED2Q9BTP6 218 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 STXBP5LQ9Y2K9 1186 aa30.55■■■□□ 2.48
SMARCD2-210ENST00000584400 ZBTB42B2RXF5 422 aa30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 ZNF862O60290 1169 aa30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 C22orf31O95567 290 aa30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 GHRP10912 638 aa30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 ORC2Q13416 577 aaPredicted RBP30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 FBXO47Q5MNV8 452 aa30.54■■■□□ 2.48
SMARCD2-210ENST00000584400 TSHZ1Q6ZSZ6 1077 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms