RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 MCM6Q14566 821 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SWSAP1Q6NVH7 229 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 CNNM4Q6P4Q7 775 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PLPPR4Q7Z2D5 763 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SYT2Q8N9I0 419 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 AFG1LQ8WV93 481 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 FAM167AQ96KS9 214 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 AZI2Q9H6S1 392 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 ANKEF1Q9NU02 776 aa18.66■□□□□ 0.58
CDK5RAP3-230ENST00000584042 A6NJR5 290 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 OATP04181 439 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 INHAP05111 366 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 LGALS2P05162 132 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PRR29P0C7W0 189 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 AFMP43652 599 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 CPT1AP50416 773 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 STAT5BP51692 787 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PSMC6P62333 389 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 NKX3-2P78367 333 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 DPYDQ12882 1025 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PNOCQ13519 176 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 GRAMD1CQ8IYS0 662 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 LENG1Q96BZ8 264 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 C7orf25Q9BPX7 421 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 TRIM9Q9C026 710 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 UPF3AQ9H1J1 476 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 BHMT2Q9H2M3 363 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 SMARCAD1Q9H4L7 1026 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 KCND2Q9NZV8 630 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
CDK5RAP3-230ENST00000584042 PPFIA4O75335 1185 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 STBD1O95210 358 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SMC2O95347 1197 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 HSPA1AP0DMV8 641 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 HSPA1BP0DMV9 641 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 RARBP10826 455 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 DGKDQ16760 1214 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 BRDTQ58F21 947 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 XKR3Q5GH77 459 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 NT5DC1Q5TFE4 455 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SPATA20Q8TB22 786 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 PIGOQ8TEQ8 1089 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 TUBE1Q9UJT0 475 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ZNF215Q9UL58 517 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 PPME1Q9Y570 386 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SYNRGQ9UMZ2 1314 aa18.64■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SYCE3A1L190 88 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 MSCO60682 206 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CYP11B2P19099 503 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CCND3P30281 292 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CTCFP49711 727 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 RARRES1P49788 294 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 GJA9P57773 515 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ANO5Q75V66 913 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 OTUD6AQ7L8S5 288 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 TRIM50Q86XT4 487 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CKAP2LQ8IYA6 745 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 STAMQ92783 540 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 GLG1Q92896 1179 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SMARCE1Q969G3 411 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ERAP1Q9NZ08 941 aa18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CNGA1P29973 690 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ZNF445P59923 1031 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CUL4BQ13620 913 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 DHX8Q14562 1220 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ATP8B4Q8TF62 1192 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 BBXQ8WY36 941 aaPredicted RBP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SPC25Q9HBM1 224 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 DDX20Q9UHI6 824 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 PCDHA5Q9Y5H7 936 aa18.62■□□□□ 0.57
CDK5RAP3-230ENST00000584042 MYMKA6NI61 221 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ADAMTS4O75173 837 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 F2P00734 622 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ZNF286BP0CG31 522 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ATP4AP20648 1035 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 ASIC1P78348 528 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 PLA2G4FQ68DD2 849 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 TRIML1Q8N9V2 468 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 DDX12PQ92771 950 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 GSDMAQ96QA5 445 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 C16orf70Q9BSU1 422 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 RUSC1Q9BVN2 902 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 TIPINQ9BVW5 301 aa18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 NIFKQ9BYG3 293 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-230ENST00000584042 BLZF1Q9H2G9 400 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms