RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 GRIK1P39086 918 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 LMNB2Q03252 620 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ATXN7L3BQ96GX2 97 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 KCNQ3O43525 872 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ADORA2BP29275 332 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ESRRGP62508 458 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 MMP19Q99542 508 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 SPDYE7PQ495Y7 208 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 TBCKQ8TEA7 893 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 PIGOQ8TEQ8 1089 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 HSPA4LO95757 839 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 TAC1P20366 129 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 TRAF3IP3Q9Y228 551 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 HUS1O60921 280 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 EFCAB14O75071 495 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 PMS1P54277 932 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 ZMAT2Q96NC0 199 aaKnown RBP12.12□□□□□ -0.47
MSI2-217ENST00000583705 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
MSI2-217ENST00000583705 KRT87PA6NCN2 255 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 PPP2R5BQ15173 497 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 CHCHD3Q9NX63 227 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 COPB2P35606 906 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 IMPACTQ9P2X3 320 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 TSPOAP1O95153 1857 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 EPB42P16452 691 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 CDC25AP30304 524 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 AGR3Q8TD06 166 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 PPP1R14AQ96A00 147 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 SKOR1P84550 965 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 ME3Q16798 604 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 PRXQ9BXM0 1461 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 CAPS2Q9BXY5 557 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 TRIM45Q9H8W5 580 aaPredicted RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 SEC24BO95487 1268 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 FTCDO95954 541 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 BHMTQ93088 406 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 POLD4Q9HCU8 107 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
MSI2-217ENST00000583705 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
MSI2-217ENST00000583705 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 NUMBP49757 651 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
MSI2-217ENST00000583705 TAF1BQ53T94 588 aaPredicted RBP12.1□□□□□ -0.47
MSI2-217ENST00000583705 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
MSI2-217ENST00000583705 SNX21Q969T3 373 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 LCP1P13796 627 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 ANGPT1Q15389 498 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 C2CD2LO14523 706 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 SASH1O94885 1247 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 KHDRBS2Q5VWX1 349 aaKnown RBP12.1□□□□□ -0.47
MSI2-217ENST00000583705 SIX5Q8N196 739 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 AP1M1Q9BXS5 423 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
MSI2-217ENST00000583705 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
MSI2-217ENST00000583705 CTSHP09668 335 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms