RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 SQORQ9Y6N5 450 aa9.91□□□□□ -0.82
CDK5RAP3-229ENST00000583697 V9GY48 417 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-229ENST00000583697 COL1A2P08123 1366 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 NID2Q14112 1375 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 C5orf67F2Z3F1 127 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 H3BQ06 376 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 HBP1O60381 514 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 STAG3L1P0CL83 205 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 SCG2P13521 617 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 IL9P15248 144 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 CDC27P30260 824 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 KRT76Q01546 638 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 FUT2Q10981 343 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 ITGB3BPQ13352 177 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 TCEAL5Q5H9L2 206 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 JAKMIP3Q5VZ66 844 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 MIS18BP1Q6P0N0 1132 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 BLOC1S2Q6QNY1 142 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PLA2G4DQ86XP0 818 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 NPAS4Q8IUM7 802 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 CCDC60Q8IWA6 550 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 CCDC148Q8NFR7 591 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 CYP2W1Q8TAV3 490 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 BRF1Q92994 677 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PPP2R3CQ969Q6 453 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PABPC5Q96DU9 382 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 JAKMIP1Q96N16 626 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 RC3H2Q9HBD1 1191 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 C6orf50Q9HD87 102 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 ZNF302Q9NR11 478 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 CLDND1Q9NY35 253 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 GINS2Q9Y248 185 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PCDHA2Q9Y5H9 948 aa9.9□□□□□ -0.82
CDK5RAP3-229ENST00000583697 PLXNA4Q9HCM2 1894 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ESYT2A0FGR8 921 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 IPO5O00410 1097 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 MEIS1O00470 390 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ENPP3O14638 875 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 DGKIO75912 1065 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 MMP1P03956 469 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 GNA11P29992 359 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 BMPR1AP36894 532 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 APOBRQ0VD83 1088 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 NFX1Q12986 1120 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 PAN2Q504Q3 1202 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 TMEM31Q5JXX7 168 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 Q6ZUG5 572 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 CMTR2Q8IYT2 770 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 GJD3Q8N144 294 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 NME8Q8N427 588 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ATP8B4Q8TF62 1192 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 LINC01599Q8WXQ3 324 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ZNF577Q9BSK1 485 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 PLVAPQ9BX97 442 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 CELF4Q9BZC1 486 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 AGO3Q9H9G7 860 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 PADI3Q9ULW8 664 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
CDK5RAP3-229ENST00000583697 KDM3AQ9Y4C1 1321 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 IGLV3-22A0A075B6J6 115 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 IGKV6D-21A0A0A0MT36 114 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 DENND3A2RUS2 1198 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 FAM86B1E9PN63 330 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 GRM6O15303 877 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 NCK2O43639 380 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 RPS6KA5O75582 802 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 REC8O95072 547 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ATG7O95352 703 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 FAM86B2P0C5J1 330 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 CPA1P15085 419 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 KLRC1P26715 233 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ADD1P35611 737 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 FAM178BQ8IXR5 827 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 SMAP1Q8IYB5 467 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 BICD2Q8TD16 824 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 NEK9Q8TD19 979 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 CLP1Q92989 425 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 P2RX5Q93086 422 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ZNF689Q96CS4 500 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 RNF26Q9BY78 433 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 ZMYND12Q9H0C1 365 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 EPHX3Q9H6B9 360 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 TBC1D22BQ9NU19 505 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 RAPGEFL1Q9UHV5 662 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 SAMM50Q9Y512 469 aa9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 MRPL42Q9Y6G3 142 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-229ENST00000583697 MYH9P35579 1960 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-229ENST00000583697 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms