RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
RFFL-210ENST00000582308 FAM160B1Q5W0V3 765 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 CCSAPQ6IQ19 270 aaPredicted RBP10.67□□□□□ -0.7
RFFL-210ENST00000582308 PDXDC2PQ6P474 469 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 PIGOQ8TEQ8 1089 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 KAT2BQ92831 832 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 GLG1Q92896 1179 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 ATP6V0A1Q93050 837 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 DHX58Q96C10 678 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 CDK5RAP3Q96JB5 506 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 DEFB118Q96PH6 123 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 RNF208Q9H0X6 261 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 SMARCAD1Q9H4L7 1026 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 SPC25Q9HBM1 224 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 BLOC1S4Q9NUP1 217 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
RFFL-210ENST00000582308 TMEM150BA6NC51 233 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 E9PMD0 336 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 ACTN4O43707 911 aaKnown RBP10.66□□□□□ -0.7
RFFL-210ENST00000582308 KPNA6O60684 536 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 MYL3P08590 195 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 MARK3P27448 753 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 CST5P28325 142 aaPredicted RBP10.66□□□□□ -0.7
RFFL-210ENST00000582308 STAT6P42226 847 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 PURAQ00577 322 aaKnown RBP10.66□□□□□ -0.7
RFFL-210ENST00000582308 PRKCEQ02156 737 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 PLCB4Q15147 1175 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 KCNA10Q16322 511 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 ANO5Q75V66 913 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 TRMT1LQ7Z2T5 733 aaKnown RBP10.66□□□□□ -0.7
RFFL-210ENST00000582308 IQUBQ8NA54 791 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 RASSF8Q8NHQ8 419 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 NACC1Q96RE7 527 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 NT5C3AQ9H0P0 336 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 RNPEPQ9H4A4 650 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 AZI2Q9H6S1 392 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 SERTAD1Q9UHV2 236 aa10.66□□□□□ -0.7
RFFL-210ENST00000582308 H3BRB1 525 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 HAS3O00219 553 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-210ENST00000582308 EYA4O95677 639 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 F2P00734 622 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 OATP04181 439 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
RFFL-210ENST00000582308 GJB1P08034 283 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 SLFN14P0C7P3 912 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-210ENST00000582308 YWHABP31946 246 aaKnown RBP10.65□□□□□ -0.7
RFFL-210ENST00000582308 SLC26A2P50443 739 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 MCM6Q14566 821 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 PLA2G4FQ68DD2 849 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 RNF180Q86T96 592 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 KCTD17Q8N5Z5 321 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 ATP8B4Q8TF62 1192 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 RAD54LQ92698 747 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 MTG1Q9BT17 334 aaPredicted RBP10.65□□□□□ -0.7
RFFL-210ENST00000582308 NIFKQ9BYG3 293 aaKnown RBP10.65□□□□□ -0.7
RFFL-210ENST00000582308 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 TUT1Q9H6E5 874 aaKnown RBP10.65□□□□□ -0.7
RFFL-210ENST00000582308 ANKEF1Q9NU02 776 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 ERAP1Q9NZ08 941 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 OGDHLQ9ULD0 1010 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 DNM3Q9UQ16 869 aa10.65□□□□□ -0.7
RFFL-210ENST00000582308 ZBTB42B2RXF5 422 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 ZEB2O60315 1214 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 MBD3O95983 291 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 ASGR1P07306 291 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 PTMSP20962 102 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 PSEN2P49810 448 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 ACLYP53396 1101 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 NPEPPSP55786 919 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 TARBP2Q15633 366 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 KRBA2Q6ZNG9 492 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 GRAMD1CQ8IYS0 662 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 PCSK9Q8NBP7 692 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 PPP1R13LQ8WUF5 828 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 LARP4BQ92615 738 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 STAMQ92783 540 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 PAGE5Q96GU1 130 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 FAM167AQ96KS9 214 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 TIGD1Q96MW7 591 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 MTRQ99707 1265 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 SH2D3AQ9BRG2 576 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 PYM1Q9BRP8 204 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 TSEN34Q9BSV6 310 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 CUEDC2Q9H467 287 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 NRBP2Q9NSY0 501 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms