RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 WNK4Q96J92 1243 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 RUSC1Q9BVN2 902 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 KCNH7Q9NS40 1196 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 FAM184BQ9ULE4 1060 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 A0A0G2JMZ2 1700 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 ITGB5P18084 799 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 GJA5P36382 358 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 RPS6P62753 249 aaKnown RBP25■■□□□ 1.59
CCDC47-204ENST00000582252 MEA1Q16626 185 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 KNOP1Q1ED39 458 aaKnown RBP25■■□□□ 1.59
CCDC47-204ENST00000582252 BMT2Q1RMZ1 405 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 TKFCQ3LXA3 575 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 STXBP4Q6ZWJ1 553 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 EPM2AIP1Q7L775 607 aaPredicted RBP25■■□□□ 1.59
CCDC47-204ENST00000582252 SMC1BQ8NDV3 1235 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 FGFBP2Q9BYJ0 223 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 MRPL44Q9H9J2 332 aaKnown RBP25■■□□□ 1.59
CCDC47-204ENST00000582252 TBC1D22BQ9NU19 505 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 ODF2LQ9ULJ1 636 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 ADAMTS5Q9UNA0 930 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 AGTPBP1Q9UPW5 1226 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 TRAF3IP3Q9Y228 551 aa25■■□□□ 1.59
CCDC47-204ENST00000582252 PASKQ96RG2 1323 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 KIF5CO60282 957 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 CYLC1P35663 651 aaPredicted RBP24.99■■□□□ 1.59
CCDC47-204ENST00000582252 ARHGAP29Q52LW3 1261 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 PIGOQ8TEQ8 1089 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 EDEM3Q9BZQ6 932 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 TCEAL9Q9UHQ7 104 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 UBE4BO95155 1302 aa24.99■■□□□ 1.59
CCDC47-204ENST00000582252 PDXKO00764 312 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 EIF3DO15371 548 aaKnown RBP eCLIP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 HUNKP57058 714 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 ADAM9Q13443 819 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 MTMR1Q13613 665 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 C1orf186Q6ZWK4 172 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 LXNQ9BS40 222 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 AGO4Q9HCK5 861 aaKnown RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 RNF146Q9NTX7 359 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 SIK3Q9Y2K2 1263 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 EPN1Q9Y6I3 576 aaPredicted RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 P4HBP07237 508 aaKnown RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 ZBTB48P10074 688 aaPredicted RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 RPL13P26373 211 aaKnown RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 CDK17Q00537 523 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 PPP2R3AQ06190 1150 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 PGM5Q15124 567 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 CCDC170Q8IYT3 715 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 TAAR1Q96RJ0 339 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 PARVGQ9HBI0 331 aa24.98■■□□□ 1.59
CCDC47-204ENST00000582252 TYW1Q9NV66 732 aaKnown RBP24.98■■□□□ 1.59
CCDC47-204ENST00000582252 ARHGEF35A5YM69 484 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 SPDYE16A6NNV3 312 aaPredicted RBP24.97■■□□□ 1.59
CCDC47-204ENST00000582252 NDUFA10O95299 355 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 IPO7O95373 1038 aaKnown RBP24.97■■□□□ 1.59
CCDC47-204ENST00000582252 GCNT3O95395 438 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 IRX3P78415 501 aaPredicted RBP24.97■■□□□ 1.59
CCDC47-204ENST00000582252 MOGSQ13724 837 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 ARHGEF16Q5VV41 709 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 NEK11Q8NG66 645 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 IL31RAQ8NI17 732 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 RMDN3Q96TC7 470 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 PXMP2Q9NR77 195 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 MYO1AQ9UBC5 1043 aa24.97■■□□□ 1.59
CCDC47-204ENST00000582252 EIF2AK2P19525 551 aaKnown RBP24.96■■□□□ 1.59
CCDC47-204ENST00000582252 NR2F2P24468 414 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 GTF2A2P52657 109 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 KRT83P78385 493 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 NSMFQ6X4W1 530 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 SLC30A10Q6XR72 485 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 REPS2Q8NFH8 660 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 ZSWIM4Q9H7M6 989 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 MMRN2Q9H8L6 949 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 AGPAT5Q9NUQ2 364 aa24.96■■□□□ 1.59
CCDC47-204ENST00000582252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.96■■□□□ 1.59
CCDC47-204ENST00000582252 RASSF10A6NK89 507 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 ATP2A1O14983 1001 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 CETPP11597 493 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 CCND2P30279 289 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 KLK7P49862 253 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 MRPS9P82933 396 aaKnown RBP24.95■■□□□ 1.59
CCDC47-204ENST00000582252 TRIM59Q8IWR1 403 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 MYCT1Q8N699 235 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 ZFP91Q96JP5 570 aaPredicted RBP24.95■■□□□ 1.59
CCDC47-204ENST00000582252 PDCD2LQ9BRP1 358 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 LZTFL1Q9NQ48 299 aa24.95■■□□□ 1.59
CCDC47-204ENST00000582252 RSPH10B2B2RC85 870 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 DDX39AO00148 427 aaKnown RBP24.95■■□□□ 1.58
CCDC47-204ENST00000582252 URI1O94763 535 aaPredicted RBP24.95■■□□□ 1.58
CCDC47-204ENST00000582252 RSPH10BP0C881 870 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 GUCY2CP25092 1073 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 CASP5P51878 434 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 SPRYD7Q5W111 196 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 SNRNP48Q6IEG0 339 aaKnown RBP24.95■■□□□ 1.58
CCDC47-204ENST00000582252 FRMD5Q7Z6J6 570 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 ACRBPQ8NEB7 543 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 CHP1Q99653 195 aa24.95■■□□□ 1.58
CCDC47-204ENST00000582252 NUCKS1Q9H1E3 243 aaKnown RBP24.95■■□□□ 1.58
CCDC47-204ENST00000582252 MYBP10242 640 aa24.94■■□□□ 1.58
CCDC47-204ENST00000582252 MYCLP12524 364 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms