RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 DDX39AO00148 427 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 LAD1O00515 517 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 DHX15O43143 795 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 OR52Z1P0C646 297 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 SFNP31947 248 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 TOB1P50616 345 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 JAK3P52333 1124 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 ACTR2P61160 394 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 PURAQ00577 322 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 ZNF174Q15697 407 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 MIS18BP1Q6P0N0 1132 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 CXCL17Q6UXB2 119 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 THEGQ9P2T0 379 aa15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-220ENST00000581737 PSMD10O75832 226 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 F2P00734 622 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 CYP2C18P33260 490 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 TCF7P36402 384 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 FAM126BQ8IXS8 530 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 UHRF1Q96T88 793 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 GAS2L1Q99501 681 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 AZI2Q9H6S1 392 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 RCOR1Q9UKL0 485 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 MYH9P35579 1960 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 UMODL1Q5DID0 1318 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 EMSYQ7Z589 1322 aa15.14■□□□□ 0.01
CSNK1D-220ENST00000581737 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 WNT7AO00755 349 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 CCNE2O96020 404 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 LGALS2P05162 132 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PSAPP07602 524 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 SUPT20HL2P0C7V6 817 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 IGFBP4P22692 258 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 ME1P48163 572 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PPP2R5CQ13362 524 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PPIGQ13427 754 aaKnown RBP eCLIP15.13■□□□□ 0.011e-8■□□□□ 9.7
CSNK1D-220ENST00000581737 TMEM266Q2M3C6 531 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 FAM160B1Q5W0V3 765 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 HAS1Q92839 578 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 MTMR9Q96QG7 549 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 UIMC1Q96RL1 719 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 SMARCAD1Q9H4L7 1026 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 BCAS3Q9H6U6 928 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PCDHA12Q9UN75 941 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 SAMM50Q9Y512 469 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CSNK1D-220ENST00000581737 WDR81Q562E7 1941 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 GSTTP1A0A1W2PQM5 241 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 FSD2A1L4K1 749 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 ARVCFO00192 962 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 BACH1O14867 736 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 CHMP2AO43633 222 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 LGR5O75473 907 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 ATG7O95352 703 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 ZNF286BP0CG31 522 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 MYOGP15173 224 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 PLA2G5P39877 138 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 PRPHP41219 470 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 SLC26A2P50443 739 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 MRPS5P82675 430 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 TFF2Q03403 129 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 PTGDRQ13258 359 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 UTP14CQ5TAP6 766 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 GLG1Q92896 1179 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 RAB34Q9BZG1 259 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 NUP62CLQ9H1M0 184 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 TMEM60Q9H2L4 133 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 UNC45AQ9H3U1 944 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 TTC12Q9H892 705 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 ERAP1Q9NZ08 941 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 VAV3Q9UKW4 847 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 MROH7Q68CQ1 1323 aa15.12■□□□□ 0.01
CSNK1D-220ENST00000581737 BDP1A6H8Y1 2624 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 H3BRB1 525 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 SPTLC2O15270 562 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 GADD45BO75293 160 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 CD4P01730 458 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 TXKP42681 527 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 PSEN2P49810 448 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 RABGGTBP53611 331 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 PTPN11Q06124 597 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 FAM173BQ6P4H8 233 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 B3GNT9Q6UX72 402 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 ABHD15Q6UXT9 468 aa15.11■□□□□ 0.01
CSNK1D-220ENST00000581737 HERVK_113Q902F9 699 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms