RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 DCLK2Q8N568 766 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 ZBTB38Q8NAP3 1195 aaPredicted RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 RNASE11Q8TAA1 199 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 LRRC8CQ8TDW0 803 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 COQ7Q99807 217 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 IPO11Q9UI26 975 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 ABT1Q9ULW3 272 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 SLC8A2Q9UPR5 921 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 PDE8BO95263 885 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 IGKV5-2P06315 115 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 BFSP1Q12934 665 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 NCAPH2Q6IBW4 605 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 RNF207Q6ZRF8 634 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 MYLK4Q86YV6 388 aaPredicted RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 U2AF1L4Q8WU68 220 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 CNOT6LQ96LI5 555 aaKnown RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 CARD9Q9H257 536 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 SMARCAD1Q9H4L7 1026 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 SLC39A2Q9NP94 309 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 CNGB3Q9NQW8 809 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 PARP2Q9UGN5 583 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 ADD2P35612 726 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 MAPKAPK5Q8IW41 473 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 EEF2KMTQ96G04 330 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 OLFM3Q96PB7 478 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 MED10Q9BTT4 135 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 GREM2Q9H772 168 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 ZKSCAN7Q9P0L1 754 aaPredicted RBP8□□□□□ -1.13
CMTM4-205ENST00000581487 VAV3Q9UKW4 847 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 CLCA2Q9UQC9 943 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 MLH3Q9UHC1 1453 aa8□□□□□ -1.13
CMTM4-205ENST00000581487 POTEFA5A3E0 1075 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 GUCA1CO95843 209 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 IMPDH2P12268 514 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 EEF1B2P24534 225 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARF3P61204 181 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARF1P84077 181 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 CCZ1BP86790 482 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 CCZ1P86791 482 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RESP18Q5W5W9 173 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 SLC25A24Q6NUK1 477 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARMCX5Q6P1M9 558 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 OTULINQ96BN8 352 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 PAGE5Q96GU1 130 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 EPC1Q9H2F5 836 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RPAP3Q9H6T3 665 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 SRPRBQ9Y5M8 271 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 SUPT3HO75486 399 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ZNF189O75820 626 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARL4DP49703 201 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 C2orf54Q08AI8 447 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 THOC7Q6I9Y2 204 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARHGEF25Q86VW2 580 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 FBXL13Q8NEE6 735 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RAD18Q9NS91 495 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ETAA1Q9NY74 926 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RWDD2AQ9UIY3 292 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 KRIT1O00522 736 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 NDUFB5O43674 189 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 KLHL18O94889 574 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 GNA14O95837 355 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 POLR2FP61218 127 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 OCA2Q04671 838 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 IL25Q9H293 177 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 DPH5Q9H2P9 285 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 BATF3Q9NR55 127 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 MCF2P10911 925 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 TECP42680 631 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 LIFRP42702 1097 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 OLFML1Q6UWY5 402 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 SH3GL2Q99962 352 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 CARD10Q9BWT7 1032 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 MIS12Q9H081 205 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 KLC2Q9H0B6 622 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 PRKAB2O43741 272 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 NDUFA10O95299 355 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ZNF658Q5TYW1 1059 aaPredicted RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 CCDC105Q8IYK2 499 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 NT5C3AQ9H0P0 336 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 ZCCHC17Q9NP64 241 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 DCTN3O75935 186 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 CYP2C19P33261 490 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 GYG1P46976 350 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RASSF7Q02833 373 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 EHHADHQ08426 723 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 RBM26Q5T8P6 1007 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 NEK8Q86SG6 692 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 MSL3Q8N5Y2 521 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 POMGNT2Q8NAT1 580 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 P2RX5Q93086 422 aa7.99□□□□□ -1.13
CMTM4-205ENST00000581487 GFM2Q969S9 779 aaKnown RBP7.99□□□□□ -1.13
CMTM4-205ENST00000581487 NRBF2Q96F24 287 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms