RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 C1QL4Q86Z23 238 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 STPG3Q8N7X2 389 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 SMC1BQ8NDV3 1235 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 USP7Q93009 1102 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 ELF4Q99607 663 aaPredicted RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 TACO1Q9BSH4 297 aaKnown RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 SPC25Q9HBM1 224 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 ACSS2Q9NR19 701 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 PRAMEF22A3QJZ6 481 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 SH3D21A4FU49 640 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 DNAJC6O75061 913 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 CYP7B1O75881 506 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 CYP17A1P05093 508 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 SARSP49591 514 aaKnown RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 STRA8Q7Z7C7 330 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 FAM177A1Q8N128 213 aaPredicted RBP6.22□□□□□ -1.41
NF1-220ENST00000581113 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 INCENPQ9NQS7 918 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 SPTLC3Q9NUV7 552 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 SPO11Q9Y5K1 396 aa6.22□□□□□ -1.41
NF1-220ENST00000581113 DDX3XO00571 662 aaKnown RBP eCLIP6.21□□□□□ -1.42
NF1-220ENST00000581113 FKBP9O95302 570 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 VIL1P09327 827 aaKnown RBP6.21□□□□□ -1.42
NF1-220ENST00000581113 ADCYAP1R1P41586 468 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 FNTBP49356 437 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 MLLT6P55198 1093 aaPredicted RBP6.21□□□□□ -1.42
NF1-220ENST00000581113 OCRLQ01968 901 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 DHCR24Q15392 516 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 TRMT10BQ6PF06 316 aaKnown RBP6.21□□□□□ -1.42
NF1-220ENST00000581113 FKBP9P1Q75LS8 142 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 KRT26Q7Z3Y9 468 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 C11orf74Q86VG3 221 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 CARFQ8N187 725 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 ASB1Q9Y576 335 aa6.21□□□□□ -1.42
NF1-220ENST00000581113 IL18BPO95998 194 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 IL13P35225 146 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 SMAD2Q15796 467 aaKnown RBP6.2□□□□□ -1.42
NF1-220ENST00000581113 PRR31Q5SQ13 230 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 PASD1Q8IV76 773 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 TP53I13Q8NBR0 393 aaPredicted RBP6.2□□□□□ -1.42
NF1-220ENST00000581113 TTC1Q99614 292 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 KCND1Q9NSA2 647 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 GALNT8Q9NY28 637 aa6.2□□□□□ -1.42
NF1-220ENST00000581113 SHROOM4Q9ULL8 1493 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 GOLGA6L22H0YM25 854 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 MPIG6BO95866 241 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 ZNF28P17035 718 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 LSSP48449 732 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 NFKB2Q00653 900 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 MCTP2Q6DN12 878 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 ESRP1Q6NXG1 681 aaKnown RBP6.19□□□□□ -1.42
NF1-220ENST00000581113 LRSAM1Q6UWE0 723 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 WDR48Q8TAF3 677 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 ZCCHC14Q8WYQ9 949 aaKnown RBP6.19□□□□□ -1.42
NF1-220ENST00000581113 FOXRED1Q96CU9 486 aaPredicted RBP6.19□□□□□ -1.42
NF1-220ENST00000581113 SPATA25Q9BR10 227 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 AMNQ9BXJ7 453 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 IFT22Q9H7X7 185 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 EMC7Q9NPA0 242 aa6.19□□□□□ -1.42
NF1-220ENST00000581113 NEMP1O14524 444 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 CANXP27824 592 aaKnown RBP6.18□□□□□ -1.42
NF1-220ENST00000581113 ECE1P42892 770 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 SLURP1P55000 103 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 ATP13A4Q4VNC1 1196 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 DPP8Q6V1X1 898 aaPredicted RBP6.18□□□□□ -1.42
NF1-220ENST00000581113 LCNL1Q6ZST4 164 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 RTN4RL1Q86UN2 441 aaPredicted RBP6.18□□□□□ -1.42
NF1-220ENST00000581113 AFAP1L2Q8N4X5 818 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
NF1-220ENST00000581113 UBA6A0AVT1 1052 aaPredicted RBP6.17□□□□□ -1.42
NF1-220ENST00000581113 TGM5O43548 720 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 TRIM13O60858 407 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 CYP1A1P04798 512 aaPredicted RBP6.17□□□□□ -1.42
NF1-220ENST00000581113 COL6A1P12109 1028 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 CPEP16870 476 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 BPIP17213 487 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 BMP7P18075 431 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 ID4P47928 161 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 KCNC1P48547 511 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 JAG1P78504 1218 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 IL13RA1P78552 427 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 SMAD3P84022 425 aaKnown RBP6.17□□□□□ -1.42
NF1-220ENST00000581113 SLC6A3Q01959 620 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 EPHA7Q15375 998 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 NME9Q86XW9 330 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 ZZZ3Q8IYH5 903 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 CALML6Q8TD86 181 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 ADAMTS17Q8TE56 1095 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 RTF1Q92541 710 aaKnown RBP6.17□□□□□ -1.42
NF1-220ENST00000581113 E2F7Q96AV8 911 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 BTBD2Q9BX70 525 aa6.17□□□□□ -1.42
NF1-220ENST00000581113 FAM126AQ9BYI3 521 aaPredicted RBP6.17□□□□□ -1.42
NF1-220ENST00000581113 H0Y858 1186 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms