RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SGMS1Q86VZ5 419 aa11.75□□□□□ -0.53
GGA3-210ENST00000580799 NME8Q8N427 588 aa11.75□□□□□ -0.53
GGA3-210ENST00000580799 LINC01599Q8WXQ3 324 aa11.75□□□□□ -0.53
GGA3-210ENST00000580799 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
GGA3-210ENST00000580799 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
GGA3-210ENST00000580799 MRPL42Q9Y6G3 142 aaKnown RBP11.75□□□□□ -0.53
GGA3-210ENST00000580799 hCG_1642624A0A1W2PR95 340 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 SLC27A2O14975 620 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 EYA4O95677 639 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 ITGB1P05556 798 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 NDUFV1P49821 464 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 STAT5BP51692 787 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 KRT76Q01546 638 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 CLUL1Q15846 466 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 CEP55Q53EZ4 464 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
GGA3-210ENST00000580799 SPPL3Q8TCT6 385 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 MSLNLQ96KJ4 702 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 MFSD14AQ96MC6 490 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 LSG1Q9H089 658 aaKnown RBP11.74□□□□□ -0.53
GGA3-210ENST00000580799 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 RIC8AQ9NPQ8 531 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
GGA3-210ENST00000580799 LRFN2Q9ULH4 789 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
GGA3-210ENST00000580799 STXBP3O00186 592 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 LINC01565O15544 149 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 ATG7O95352 703 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 COL1A2P08123 1366 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 GTF2F1P35269 517 aaKnown RBP eCLIP11.73□□□□□ -0.53
GGA3-210ENST00000580799 NAPAP54920 295 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 UBE3AQ05086 875 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 NECTIN1Q15223 517 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 ODR4Q5SWX8 454 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 CREB3L3Q68CJ9 461 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 WWC2Q6AWC2 1192 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 NIPA1Q7RTP0 329 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 RNF135Q8IUD6 432 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 KLHL23Q8NBE8 558 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 ZBTB10Q96DT7 871 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
GGA3-210ENST00000580799 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
GGA3-210ENST00000580799 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 CNTNAP5Q8WYK1 1306 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 IGKV6D-21A0A0A0MT36 114 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 MEIS1O00470 390 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 HBP1O60381 514 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 ARP10275 920 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 DNAJB1P25685 340 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 SREBF1P36956 1147 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
GGA3-210ENST00000580799 ADCY7P51828 1080 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 NHLH1Q02575 133 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 COASYQ13057 564 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
GGA3-210ENST00000580799 AP3B2Q13367 1082 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 PAN2Q504Q3 1202 aaKnown RBP11.72□□□□□ -0.53
GGA3-210ENST00000580799 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 HFE2Q6ZVN8 426 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 ALYREFQ86V81 257 aaKnown RBP11.72□□□□□ -0.53
GGA3-210ENST00000580799 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 POF1BQ8WVV4 589 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 EDAQ92838 391 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 C1orf112Q9NSG2 853 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 PCDHB7Q9Y5E2 793 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
GGA3-210ENST00000580799 RPS6KA5O75582 802 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 CSPG5O95196 566 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 KLRC1P26715 233 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 NRIP1P48552 1158 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.53
GGA3-210ENST00000580799 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.53
GGA3-210ENST00000580799 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
GGA3-210ENST00000580799 ABHD15Q6UXT9 468 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 ATP8B4Q8TF62 1192 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 FBXL18Q96ME1 805 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 TMX1Q9H3N1 280 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 ERVK-5Q9HDB9 667 aa11.71□□□□□ -0.53
GGA3-210ENST00000580799 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms