RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 ATP8B4Q8TF62 1192 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 VTI1AQ96AJ9 217 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 CRISPLD2Q9H0B8 497 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 ANKEF1Q9NU02 776 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
SNORD3C-201ENST00000580533 COL1A2P08123 1366 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 RRN3P2A6NIE6 340 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 RPLP2P05387 115 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 PFKFB1P16118 471 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 ACLYP53396 1101 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 BEX3Q00994 111 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 GRIN1Q05586 938 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 PTPN11Q06124 597 aaPredicted RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 MFSD10Q14728 455 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 ZNF484Q5JVG2 852 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 TMEM63BQ5T3F8 832 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 EPSTI1Q96J88 318 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 SEPT9Q9UHD8 586 aaPredicted RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
SNORD3C-201ENST00000580533 A0A0U1RQG5 324 aaPredicted RBP13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 ARHGEF35A5YM69 484 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 MED24O75448 989 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 PSEN2P49810 448 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 KIAA0753Q2KHM9 967 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 TMEM119Q4V9L6 283 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 SPECC1Q5M775 1068 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 NRCAMQ92823 1304 aa13.11□□□□□ -0.31
SNORD3C-201ENST00000580533 TCHHQ07283 1943 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 A0A1B0GVL5 298 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 CTAGE5O15320 804 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 MAGEB2O15479 319 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 POLR2DO15514 142 aaKnown RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 EYA4O95677 639 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 MYL1P05976 194 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 PLCG1P19174 1290 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 MARK3P27448 753 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 CDC25AP30304 524 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 RFC5P40937 340 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 PLCB4Q15147 1175 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 NIFKQ9BYG3 293 aaKnown RBP13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
SNORD3C-201ENST00000580533 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 A0A1W2PQ45 241 aaPredicted RBP13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 A0A1W2PQY0 241 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 C17orf102A2RUQ5 167 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 HAS3O00219 553 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 DGAT1O75907 488 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 SLFN14P0C7P3 912 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 TMOD1P28289 359 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 DNM2P50570 870 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 CHMP4BP1P59074 171 aa13.09□□□□□ -0.31
SNORD3C-201ENST00000580533 TBC1D8BQ0IIM8 1120 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms