RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 CEP131Q9UPN4 1083 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 LTBP2Q14767 1821 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 PDE4DIPQ5VU43 2346 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
MKS1-208ENST00000579358 EML1O00423 815 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 LAD1O00515 517 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 OATP04181 439 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
MKS1-208ENST00000579358 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
MKS1-208ENST00000579358 CSF2RAP15509 400 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 SELPP16109 830 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 SYT1P21579 422 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 TXKP42681 527 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 CCL23P55773 120 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 PSMC5P62195 406 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 ZNF174Q15697 407 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 UGCGQ16739 394 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 NCAPH2Q6IBW4 605 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
MKS1-208ENST00000579358 LRRC8DQ7L1W4 858 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 WNT8BQ93098 351 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 IL23AQ9NPF7 189 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
MKS1-208ENST00000579358 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 PCDHB6Q9Y5E3 794 aa11.28□□□□□ -0.6
MKS1-208ENST00000579358 SMIM35A0A1B0GVV1 85 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 ZBTB42B2RXF5 422 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 PRPHP41219 470 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
MKS1-208ENST00000579358 IGBP1P78318 339 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 NBR1Q14596 966 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 RSPH3Q86UC2 560 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 C4orf19Q8IY42 314 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
MKS1-208ENST00000579358 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 SCLYQ96I15 445 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 PPME1Q9Y570 386 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
MKS1-208ENST00000579358 DOCK5Q9H7D0 1870 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 RSPH10B2B2RC85 870 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 MAGEB2O15479 319 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 STX6O43752 255 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 STBD1O95210 358 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 LYPLA2O95372 231 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 C22orf31O95567 290 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 BMP15O95972 392 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 CXCL10P02778 98 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 RSPH10BP0C881 870 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 KLRC1P26715 233 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 THPOP40225 353 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
MKS1-208ENST00000579358 EPHB4P54760 987 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 PTGDRQ13258 359 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 TMEM266Q2M3C6 531 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 FAM26DQ5JW98 314 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 TMEM240Q5SV17 173 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 RUFY4Q6ZNE9 571 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 TRAPPC12Q8WVT3 735 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 EIF2AK1Q9BQI3 630 aaKnown RBP11.26□□□□□ -0.61
MKS1-208ENST00000579358 LXNQ9BS40 222 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 NIFKQ9BYG3 293 aaKnown RBP11.26□□□□□ -0.61
MKS1-208ENST00000579358 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
MKS1-208ENST00000579358 POTEMA6NI47 508 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 MGAT3Q09327 533 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 RESTQ13127 1097 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 SHHQ15465 462 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 TARBP2Q15633 366 aaKnown RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 LRIT3Q3SXY7 679 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 HABP4Q5JVS0 413 aaKnown RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 NME8Q8N427 588 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 HERVK_113Q902F9 699 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 DYDC2Q96IM9 177 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 HSD17B14Q9BPX1 270 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■■■■■ 27.5
MKS1-208ENST00000579358 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 WRAP73Q9P2S5 460 aaPredicted RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
MKS1-208ENST00000579358 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
MKS1-208ENST00000579358 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 M0QZ92 97 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 NBNO60934 754 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 SLITRK3O94933 977 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 FGBP02675 491 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 CTSHP09668 335 aa11.24□□□□□ -0.61
MKS1-208ENST00000579358 ACRP10323 421 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms