RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 FAM50BQ9Y247 325 aa12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
CSNK1D-210ENST00000579308 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 KDM3AQ9Y4C1 1321 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 MMP1P03956 469 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.466e-9■■■■■ 72.3
CSNK1D-210ENST00000579308 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 STAT5BP51692 787 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 ADAM15Q13444 863 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 SMAD2Q15796 467 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 TSGA10IPQ3SY00 556 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 FAM43BQ6ZT52 329 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 MICU3Q86XE3 530 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 SPPL3Q8TCT6 385 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 TRAPPC12Q8WVT3 735 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 P2RX5Q93086 422 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 TRPV2Q9Y5S1 764 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 V9GY48 417 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
CSNK1D-210ENST00000579308 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 STXBP3O00186 592 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 DCXO43602 365 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 CCNE2O96020 404 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 ITGB1P05556 798 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 SREBF1P36956 1147 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 SLC26A2P50443 739 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 TMEM62Q0P6H9 643 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 MTHFD1LQ6UB35 978 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 ABHD15Q6UXT9 468 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 KIAA0319LQ8IZA0 1049 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 C5orf42Q9H799 3197 aa12.16□□□□□ -0.46
CSNK1D-210ENST00000579308 TRIOO75962 3097 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 TTC3P53804 2025 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 SMCO2A6NFE2 343 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 ZBTB42B2RXF5 422 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 LINC01565O15544 149 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 MBTPS2O43462 519 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 TBX10O75333 385 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 EYA4O95677 639 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 ATP4AP20648 1035 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 KLRC1P26715 233 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 IRS1P35568 1242 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 ADCY7P51828 1080 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 NAPAP54920 295 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 ATP8B4Q8TF62 1192 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 MSLNLQ96KJ4 702 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
CSNK1D-210ENST00000579308 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.47
CSNK1D-210ENST00000579308 FAM86B1E9PN63 330 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 hCG_1984214I3L0E3 225 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 M0QZ92 97 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 ZBTB43O43298 467 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 HBP1O60381 514 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 MGEA5O60502 916 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 CYP3A4P08684 503 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 FAM86B2P0C5J1 330 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 SCG2P13521 617 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 CDC27P30260 824 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 KRT76Q01546 638 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 PAK2Q13177 524 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 CLUL1Q15846 466 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 RTN1Q16799 776 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 TMEM266Q2M3C6 531 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 ADCK5Q3MIX3 580 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 ZNF713Q8N859 430 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 GLT8D2Q9H1C3 349 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 ERVK-5Q9HDB9 667 aa12.14□□□□□ -0.47
CSNK1D-210ENST00000579308 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms