RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MYO9BQ13459 2157 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ADGRA3Q8IWK6 1321 aa10.47□□□□□ -0.73
CDK5RAP3-211ENST00000578996 H3BNC9 293 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ENPP3O14638 875 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ADAMTS3O15072 1205 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PRPF3O43395 683 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 RPLP2P05387 115 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 KCNA5P22460 613 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 KLRC1P26715 233 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 GNA11P29992 359 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SLC26A2P50443 739 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 BTG3Q14201 252 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PKN1Q16512 942 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 TIGD5Q53EQ6 642 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PRR16Q569H4 304 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 KCNB2Q92953 911 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 MRPL38Q96DV4 380 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PPP1R16BQ96T49 567 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 ZMYND12Q9H0C1 365 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 AGO3Q9H9G7 860 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 NCOA5Q9HCD5 579 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 VPS54Q9P1Q0 977 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 SAMM50Q9Y512 469 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PCDHA2Q9Y5H9 948 aa10.46□□□□□ -0.73
CDK5RAP3-211ENST00000578996 PRRC2BQ5JSZ5 2229 aaKnown RBP10.46□□□□□ -0.74
CDK5RAP3-211ENST00000578996 IGLV3-22A0A075B6J6 115 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 SMIM35A0A1B0GVV1 85 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 HBP1O60381 514 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ATG7O95352 703 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CYP3A4P08684 503 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NLRP5P59047 1200 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 KRT76Q01546 638 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 PAN2Q504Q3 1202 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 MCTP2Q6DN12 878 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ABHD15Q6UXT9 468 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CCDC148Q8NFR7 591 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ATP8B4Q8TF62 1192 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 LINC01599Q8WXQ3 324 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 FTHL17Q9BXU8 183 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 RNF26Q9BY78 433 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CELF4Q9BZC1 486 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 PADI3Q9ULW8 664 aa10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NID2Q14112 1375 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 IGSF9BQ9UPX0 1349 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 IGKV6D-21A0A0A0MT36 114 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CHMP2AO43633 222 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NEFLP07196 543 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 PSAPP07602 524 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 STK3Q13188 491 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TCEAL5Q5H9L2 206 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 RUFY3Q7L099 469 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NME8Q8N427 588 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 METTL13Q8N6R0 699 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 C11orf84Q9BUA3 381 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NSUN3Q9H649 340 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TBC1D22BQ9NU19 505 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 GABBR1Q9UBS5 961 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 LRFN2Q9ULH4 789 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 RWDD3Q9Y3V2 267 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 COL4A6Q14031 1691 aa10.44□□□□□ -0.74
CDK5RAP3-211ENST00000578996 KAT6AQ92794 2004 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 COL1A2P08123 1366 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 DENND3A2RUS2 1198 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 H3BQ06 376 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CPLX1O14810 134 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 DHX15O43143 795 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 RPS6KA5O75582 802 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 DGKIO75912 1065 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 STAG3L1P0CL83 205 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 IFNAR1P17181 557 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ATP4AP20648 1035 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 COL9A1P20849 921 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 BMPR1AP36894 532 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 SSRP1Q08945 709 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 TOB2Q14106 344 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NTRK3Q16288 839 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 KIZQ2M2Z5 673 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ZNF484Q5JVG2 852 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 ZNF746Q6NUN9 644 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 NPAS4Q8IUM7 802 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 SMAP1Q8IYB5 467 aaPredicted RBP10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 FBXL16Q8N461 479 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 CRYGNQ8WXF5 182 aa10.43□□□□□ -0.74
CDK5RAP3-211ENST00000578996 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms