RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CALCRLQ16602 461 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 TRIM71Q2Q1W2 868 aaKnown RBP7.38□□□□□ -1.23
TRAF4-213ENST00000578917 MARCH8Q5T0T0 291 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 FAM109BQ6ICB4 259 aaPredicted RBP7.38□□□□□ -1.23
TRAF4-213ENST00000578917 FAM117BQ6P1L5 589 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 MTHFD1LQ6UB35 978 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 CCDC60Q8IWA6 550 aaPredicted RBP7.38□□□□□ -1.23
TRAF4-213ENST00000578917 SLFN12Q8IYM2 578 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 NME8Q8N427 588 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 BBXQ8WY36 941 aaPredicted RBP7.38□□□□□ -1.23
TRAF4-213ENST00000578917 WNT8BQ93098 351 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 LENG9Q96B70 501 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 ZBTB10Q96DT7 871 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 TMX3Q96JJ7 454 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 FAM167AQ96KS9 214 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 SCLT1Q96NL6 688 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 CTAGE1Q96RT6 745 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 UNC45AQ9H3U1 944 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 SUGCTQ9HAC7 445 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 PCDHA12Q9UN75 941 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 CEP131Q9UPN4 1083 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 SMC3Q9UQE7 1217 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 PCDHA2Q9Y5H9 948 aa7.38□□□□□ -1.23
TRAF4-213ENST00000578917 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
TRAF4-213ENST00000578917 IGKV6D-21A0A0A0MT36 114 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 SMIM35A0A1B0GVV1 85 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 FAM205CA6NFA0 338 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 MAGEB2O15479 319 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 SLC37A4O43826 429 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 TLL1O43897 1013 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 DKC1O60832 514 aaKnown RBP eCLIP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PSMD10O75832 226 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 UPP2O95045 317 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 AMHP03971 560 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 OATP04181 439 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 GHRP10912 638 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 IBSPP21815 317 aaPredicted RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 HOXC8P31273 242 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 MCM7P33993 719 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PBX2P40425 430 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 TXKP42681 527 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 DNM2P50570 870 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PSMC5P62195 406 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 MRPS6P82932 125 aaKnown RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 RBL2Q08999 1139 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 TBC1D8BQ0IIM8 1120 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 RASIP1Q5U651 963 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PPP2R2DQ66LE6 453 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 NCAPH2Q6IBW4 605 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 TPH2Q8IWU9 490 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 BANK1Q8NDB2 785 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 DBF4BQ8NFT6 615 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 FBXO18Q8NFZ0 1043 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 RDM1Q8NG50 284 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PHOSPHO2Q8TCD6 241 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 MAP7D2Q96T17 732 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 SLC9A7Q96T83 725 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 PBX4Q9BYU1 374 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 IFIH1Q9BYX4 1025 aaKnown RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 NKX2-4Q9H2Z4 354 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 FOXP1Q9H334 677 aaPredicted RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 ZNF576Q9H609 170 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 NOL7Q9UMY1 257 aaKnown RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 AKT3Q9Y243 479 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
TRAF4-213ENST00000578917 LCTP09848 1927 aa7.37□□□□□ -1.23
TRAF4-213ENST00000578917 A0A0C4DFX4 3053 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 FRMPD3Q5JV73 1810 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MBLAC1A4D2B0 266 aaPredicted RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 TBX3O15119 743 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 EDIL3O43854 480 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 NEMFO60524 1076 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 CHRNA1P02708 482 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 CXCL10P02778 98 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MYOGP15173 224 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 QARSP47897 775 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 WDR5P61964 334 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 ADAM17P78536 824 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 PRKCEQ02156 737 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 NFX1Q12986 1120 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MBTPS1Q14703 1052 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 ZNF174Q15697 407 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 PLEKHG4Q58EX7 1191 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 XKR3Q5GH77 459 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 EARS2Q5JPH6 523 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 FAM26DQ5JW98 314 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 EFCAB12Q6NXP0 572 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 OTUD6AQ7L8S5 288 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 RPAINQ86UA6 219 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 NOSTRINQ8IVI9 506 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 HERC6Q8IVU3 1022 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 KIAA0319LQ8IZA0 1049 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MYOCDQ8IZQ8 938 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 ETNPPLQ8TBG4 499 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms