RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SAPCD2Q86UD0 394 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 STK32CQ86UX6 486 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 NME9Q86XW9 330 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ZZZ3Q8IYH5 903 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 HIPK4Q8NE63 616 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ASB15Q8WXK1 588 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 GPR101Q96P66 508 aaPredicted RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ELF4Q99607 663 aaPredicted RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 IRF2BPLQ9H1B7 796 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 SLC39A2Q9NP94 309 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 INCENPQ9NQS7 918 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 TOMM22Q9NS69 142 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 SPTLC3Q9NUV7 552 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 GALNT8Q9NY28 637 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 H2AFY2Q9P0M6 372 aaPredicted RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 NTMQ9P121 344 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 BTBD7Q9P203 1132 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ARHGAP20Q9P2F6 1191 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 MCM8Q9UJA3 840 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 WASF3Q9UPY6 502 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 APOBEC2Q9Y235 224 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 GOLGA6L22H0YM25 854 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 NEMP1O14524 444 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ULK1O75385 1050 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 FBXO21O94952 628 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 IBSPP21815 317 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 CD40P25942 277 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 PTX3P26022 381 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 RPL13P26373 211 aaKnown RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 MC4RP32245 332 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 LSP1P33241 339 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 GLRBP48167 497 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 PHC1P78364 1004 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 SMAD3P84022 425 aaKnown RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ADCY1Q08828 1119 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 LRRC32Q14392 662 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 SMAD2Q15796 467 aaKnown RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 VWA3BQ502W6 1294 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 GPR158Q5T848 1215 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 TCERG1LQ5VWI1 586 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 DPP8Q6V1X1 898 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 CILP2Q8IUL8 1156 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 LRRC56Q8IYG6 542 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 LINC01356Q8N9X3 169 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ATL2Q8NHH9 583 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ZSCAN18Q8TBC5 510 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 FOXRED1Q96CU9 486 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 C16orf92Q96LL3 132 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ZSWIM3Q96MP5 696 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 BRINP2Q9C0B6 783 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 EMC7Q9NPA0 242 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 SPATA6Q9NWH7 488 aaPredicted RBP3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 UCKL1Q9NWZ5 548 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 ZFP69BQ9UJL9 534 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 CROTQ9UKG9 612 aa3.11□□□□□ -1.91
PTP4A1-204ENST00000578299 UBA6A0AVT1 1052 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 PRAMEF22A3QJZ6 481 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 FFAR3O14843 346 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 TGM5O43548 720 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 EYA4O95677 639 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 MPIG6BO95866 241 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 IL18BPO95998 194 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF28P17035 718 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 POU3F3P20264 500 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 CFPP27918 469 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ECE1P42892 770 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 SARSP49591 514 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ALDH6A1Q02252 535 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ROM1Q03395 351 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 DLX2Q07687 328 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 STAT4Q14765 748 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 RTP5Q14D33 572 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 STILQ15468 1287 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 TERF2Q15554 542 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 DDB1Q16531 1140 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 PTPROQ16827 1216 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 TTC38Q5R3I4 469 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 PRR31Q5SQ13 230 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 PRAMEF18Q5VWM3 479 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ESRP1Q6NXG1 681 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 CXXC5Q7LFL8 322 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 RTN4RL1Q86UN2 441 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 CARFQ8N187 725 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 STPG3Q8N7X2 389 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF610Q8N9Z0 462 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 WDR48Q8TAF3 677 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 CALML6Q8TD86 181 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF526Q8TF50 670 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ERCC4Q92889 916 aaPredicted RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 SLC5A5Q92911 643 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 FOXB1Q99853 325 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 TACO1Q9BSH4 297 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 BTBD2Q9BX70 525 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ZMAT4Q9H898 229 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 PCDH12Q9NPG4 1184 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 KCND1Q9NSA2 647 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 USP36Q9P275 1121 aaKnown RBP3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ATP8A1Q9Y2Q0 1164 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 COL4A3BPQ9Y5P4 624 aa3.1□□□□□ -1.91
PTP4A1-204ENST00000578299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms