RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 IER5Q5VY09 327 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PLA2G4DQ86XP0 818 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 REXO1Q8N1G1 1221 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 LINC01599Q8WXQ3 324 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 UBE2ZQ9H832 354 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 TRPV2Q9Y5S1 764 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 EVPLQ92817 2033 aa18.94■□□□□ 0.62
CDK5RAP3-206ENST00000578018 KIAA1671Q9BY89 1806 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 POTEB3A0JP26 581 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 DDX39AO00148 427 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ENPP3O14638 875 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 DHX15O43143 795 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PRPF3O43395 683 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CD52P31358 61 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 TMEM62Q0P6H9 643 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 GPM6BQ13491 265 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PTPROQ16827 1216 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 POTEBQ6S5H4 581 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ABHD15Q6UXT9 468 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CCDC60Q8IWA6 550 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 SQORQ9Y6N5 450 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 IGSF9BQ9UPX0 1349 aa18.93■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 SMIM35A0A1B0GVV1 85 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 M0QZ92 97 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 IPO5O00410 1097 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 BACH1O14867 736 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 REC8O95072 547 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 TIGD5Q53EQ6 642 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 MCTP2Q6DN12 878 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ATP8B4Q8TF62 1192 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PHKBQ93100 1093 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 C6orf50Q9HD87 102 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
CDK5RAP3-206ENST00000578018 C5orf67F2Z3F1 127 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CTNNB1P35222 781 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 SETQ01105 290 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 NTRK3Q16288 839 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 FAM160B1Q5W0V3 765 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 MTHFD1LQ6UB35 978 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZNF689Q96CS4 500 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 COL1A2P08123 1366 aa18.91■□□□□ 0.62
CDK5RAP3-206ENST00000578018 HBP1O60381 514 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 KCNA5P22460 613 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 GNA11P29992 359 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 EVCP57679 992 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 MIS18BP1Q6P0N0 1132 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CRIPAKQ8N1N5 446 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 NME8Q8N427 588 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 BANK1Q8NDB2 785 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 RASGRP4Q8TDF6 673 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CLP1Q92989 425 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 UIMC1Q96RL1 719 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 FTHL17Q9BXU8 183 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 RNF26Q9BY78 433 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 CELF4Q9BZC1 486 aaKnown RBP18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZNF302Q9NR11 478 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 PADI3Q9ULW8 664 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 RWDD3Q9Y3V2 267 aa18.9■□□□□ 0.62
CDK5RAP3-206ENST00000578018 ZBTB42B2RXF5 422 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PPFIA3O75145 1194 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 DGKIO75912 1065 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 RB1P06400 928 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 IFNAR1P17181 557 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 ATP4AP20648 1035 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 KLRC1P26715 233 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PSMA5P28066 241 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 BMPR1AP36894 532 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 KRT76Q01546 638 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PAK2Q13177 524 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 LEXMQ3ZCV2 418 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 RTN4RL1Q86UN2 441 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 CCDC148Q8NFR7 591 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 TBC1D22BQ9NU19 505 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PPP4R2Q9NY27 417 aa18.89■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PDIA3P30101 505 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 CIITAP33076 1130 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 BTG3Q14201 252 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 COL19A1Q14993 1142 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 PRR16Q569H4 304 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 TCEAL5Q5H9L2 206 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 ZNF484Q5JVG2 852 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 SWSAP1Q6NVH7 229 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 NPAS4Q8IUM7 802 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 LENG9Q96B70 501 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 C11orf84Q9BUA3 381 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 TMX1Q9H3N1 280 aa18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 NSUN3Q9H649 340 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-206ENST00000578018 VPS54Q9P1Q0 977 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms