RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ATP8B4Q8TF62 1192 aa25.02■■□□□ 1.6
SMARCD2-206ENST00000577990 SEMA6BQ9H3T3 888 aa25.02■■□□□ 1.6
SMARCD2-206ENST00000577990 TUBE1Q9UJT0 475 aa25.02■■□□□ 1.6
SMARCD2-206ENST00000577990 IGSF9BQ9UPX0 1349 aa25.02■■□□□ 1.6
SMARCD2-206ENST00000577990 MBLAC1A4D2B0 266 aaPredicted RBP25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 MARCH6O60337 910 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 ZNF618Q5T7W0 954 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 DEFB128Q7Z7B8 93 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 NOSTRINQ8IVI9 506 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 HAS1Q92839 578 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 VWCEQ96DN2 955 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 VAV3Q9UKW4 847 aa25.01■■□□□ 1.59
SMARCD2-206ENST00000577990 KIF28PB7ZC32 967 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 WNT7AO00755 349 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 HBP1O60381 514 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 CAND2O75155 1236 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 BAG4O95429 457 aaKnown RBP25■■□□□ 1.59
SMARCD2-206ENST00000577990 PARNO95453 639 aaKnown RBP25■■□□□ 1.59
SMARCD2-206ENST00000577990 ATP4AP20648 1035 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 MARCH8Q5T0T0 291 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 TAF2Q6P1X5 1199 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 TRAF7Q6Q0C0 670 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 CKAP2LQ8IYA6 745 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 SLFN12Q8IYM2 578 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 CHD9Q3L8U1 2897 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 PRUNE2Q8WUY3 3088 aa25■■□□□ 1.59
SMARCD2-206ENST00000577990 GRXCR1A8MXD5 290 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 NEMFO60524 1076 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 FGBP02675 491 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 ATP2B1P20020 1258 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 PPP2R5CQ13362 524 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 RUFY4Q6ZNE9 571 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 FAM167AQ96KS9 214 aa24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 CDX2Q99626 313 aaPredicted RBP24.99■■□□□ 1.59
SMARCD2-206ENST00000577990 COL1A2P08123 1366 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 DNAJB2P25686 324 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 U2AF2P26368 475 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 CALCRLQ16602 461 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 RASIP1Q5U651 963 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 TRAPPC12Q8WVT3 735 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 BBXQ8WY36 941 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 HERVK_113Q902F9 699 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 CUL9Q8IWT3 2517 aa24.98■■□□□ 1.59
SMARCD2-206ENST00000577990 TET1Q8NFU7 2136 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 RSPH10B2B2RC85 870 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 H3BQV1 296 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 RSPH10BP0C881 870 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 UGCGQ16739 394 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 ZNF484Q5JVG2 852 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 RPAINQ86UA6 219 aa24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 FTOQ9C0B1 505 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 MTIF3Q9H2K0 278 aaKnown RBP24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 CXXC1Q9P0U4 656 aaPredicted RBP24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 NOL7Q9UMY1 257 aaKnown RBP24.97■■□□□ 1.59
SMARCD2-206ENST00000577990 K7ELQ4 463 aaPredicted RBP24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 EML1O00423 815 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 ZNF862O60290 1169 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 NBNO60934 754 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 OATP04181 439 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 CTSHP09668 335 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 MCM7P33993 719 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 PBX2P40425 430 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 TRAPPC10P48553 1259 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 PRKCEQ02156 737 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 GPNMBQ14956 572 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 MTHFD1LQ6UB35 978 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 OTOP2Q7RTS6 562 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 TRMT1LQ7Z2T5 733 aaKnown RBP24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 RSPH3Q86UC2 560 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 MYLIPQ8WY64 445 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 ZBTB10Q96DT7 871 aa24.96■■□□□ 1.59
SMARCD2-206ENST00000577990 CXCL10P02778 98 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 ACTN1P12814 892 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 ORC2Q13416 577 aaPredicted RBP24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 MBTPS1Q14703 1052 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 TTC38Q5R3I4 469 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 MCTP1Q6DN14 999 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 SNX21Q969T3 373 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 MTMR9Q96QG7 549 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 CEP131Q9UPN4 1083 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 PCDHA2Q9Y5H9 948 aa24.95■■□□□ 1.58
SMARCD2-206ENST00000577990 ZBTB42B2RXF5 422 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 RPLP2P05387 115 aaKnown RBP24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 SPIRE1Q08AE8 756 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 FAM26DQ5JW98 314 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 LARP1BQ659C4 914 aaKnown RBP24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 NCAPH2Q6IBW4 605 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 DNAJB3Q8WWF6 145 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 TMEM60Q9H2L4 133 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 NRBP2Q9NSY0 501 aa24.94■■□□□ 1.58
SMARCD2-206ENST00000577990 KLRC1P26715 233 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 EPHA7Q15375 998 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 ZNF174Q15697 407 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 BANK1Q8NDB2 785 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 TIFAQ96CG3 184 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 PBX4Q9BYU1 374 aa24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 FAM49AQ9H0Q0 323 aaPredicted RBP24.93■■□□□ 1.58
SMARCD2-206ENST00000577990 PCDHA12Q9UN75 941 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms