RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 GATMP50440 423 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 IGBP1P78318 339 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 UBE3AQ05086 875 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 WTAPQ15007 396 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 PAN2Q504Q3 1202 aaKnown RBP11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 FAM43BQ6ZT52 329 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 VN1R2Q8NFZ6 395 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 CELF4Q9BZC1 486 aaKnown RBP11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 FAM49AQ9H0Q0 323 aaPredicted RBP11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 TMX1Q9H3N1 280 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 TLE6Q9H808 572 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 PCDHGC5Q9Y5F6 944 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 TAF6LQ9Y6J9 622 aa11.46□□□□□ -0.57
CALCOCO2-227ENST00000575560 KDM3AQ9Y4C1 1321 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 PER2O15055 1255 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 AVPR2P30518 371 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 VCPP55072 806 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 MTMR1Q13613 665 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 AAMPQ13685 434 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 KCNC3Q14003 757 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 TMEM184AQ6ZMB5 413 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 NME8Q8N427 588 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 RPGRIP1Q96KN7 1286 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 S1PR5Q9H228 398 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 PSTPIP2Q9H939 334 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 JADE2Q9NQC1 790 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 WDR87Q6ZQQ6 2873 aa11.45□□□□□ -0.58
CALCOCO2-227ENST00000575560 SMIM35A0A1B0GVV1 85 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 FSD2A1L4K1 749 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 E7EWF7 191 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 SARSP49591 514 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 ANTXR2P58335 489 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 ERVFC1P60507 584 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PTH1RQ03431 593 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 TMEM62Q0P6H9 643 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PAK2Q13177 524 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PTPN21Q16825 1174 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 DUSP6Q16828 381 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 MICAL1Q8TDZ2 1067 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 CDCA3Q99618 268 aaPredicted RBP11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 IRF2BPLQ9H1B7 796 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PCDHB7Q9Y5E2 793 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 PCDHB12Q9Y5F1 795 aa11.44□□□□□ -0.58
CALCOCO2-227ENST00000575560 M0QZ92 97 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 FSCN2O14926 492 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 MGEA5O60502 916 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 GFRA3O60609 400 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 FGF18O76093 207 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 KRT76Q01546 638 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 PLCB4Q15147 1175 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 TMEM266Q2M3C6 531 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 PLPPR4Q7Z2D5 763 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 SRBD1Q8N5C6 995 aaKnown RBP11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 TRAPPC12Q8WVT3 735 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 LZTS2Q9BRK4 669 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 ERVK-5Q9HDB9 667 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 JPH1Q9HDC5 661 aaPredicted RBP11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 TLR9Q9NR96 1032 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 RGS18Q9NS28 235 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 FAM86C1Q9NVL1 165 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 PKD2L1Q9P0L9 805 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 SLC9A2Q9UBY0 812 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 DCHS1Q96JQ0 3298 aa11.43□□□□□ -0.58
CALCOCO2-227ENST00000575560 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 C9IYK1 514 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 PROB1E7EW31 1015 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 DDAH1O94760 285 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 ATG7O95352 703 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 KIF5BP33176 963 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 NUBP1P53384 320 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 ACTR2P61160 394 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 FAM189BP81408 668 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 NFX1Q12986 1120 aaKnown RBP11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 SYCE2Q6PIF2 218 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 SLC24A5Q71RS6 500 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 MB21D2Q8IYB1 491 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 ZNF654Q8IZM8 581 aa11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 ATOH1Q92858 354 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-227ENST00000575560 RIPOR3Q96MK2 946 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms