RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 PLPPR4Q7Z2D5 763 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 NPAS4Q8IUM7 802 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 CMTR2Q8IYT2 770 aaKnown RBP11.92□□□□□ -0.5
TVP23B-208ENST00000575261 CYP2W1Q8TAV3 490 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 GLT8D2Q9H1C3 349 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 AGO4Q9HCK5 861 aaKnown RBP11.92□□□□□ -0.5
TVP23B-208ENST00000575261 PCDHA2Q9Y5H9 948 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 LOXHD1Q8IVV2 1947 aa11.92□□□□□ -0.5
TVP23B-208ENST00000575261 SMIM35A0A1B0GVV1 85 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 STXBP3O00186 592 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 ARP10275 920 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 SREBF1P36956 1147 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 STAT5BP51692 787 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 ZP2Q05996 745 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 HYAL1Q12794 435 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
TVP23B-208ENST00000575261 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 BMP2KLQ5H9B9 411 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 TRAPPC12Q8WVT3 735 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 P2RX5Q93086 422 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 BARHL2Q9NY43 387 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
TVP23B-208ENST00000575261 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 SMCO2A6NFE2 343 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 GOLGA8BA8MQT2 603 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 DCXO43602 365 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 CSPG5O95196 566 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 SCG2P13521 617 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 ZNF76P36508 570 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 LTBRP36941 435 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 RCAN1P53805 252 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 KRT76Q01546 638 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 FUT2Q10981 343 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 NAALADL2Q58DX5 795 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 FAM160B1Q5W0V3 765 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
TVP23B-208ENST00000575261 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 ADHFE1Q8IWW8 467 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 NME8Q8N427 588 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 TCEANC2Q96MN5 208 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
TVP23B-208ENST00000575261 CELF4Q9BZC1 486 aaKnown RBP11.9□□□□□ -0.5
TVP23B-208ENST00000575261 MRPL42Q9Y6G3 142 aaKnown RBP11.9□□□□□ -0.5
TVP23B-208ENST00000575261 COL1A2P08123 1366 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 PIEZO1Q92508 2521 aa11.9□□□□□ -0.5
TVP23B-208ENST00000575261 IGKV6D-21A0A0A0MT36 114 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 MEIS1O00470 390 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 BACH1O14867 736 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 HBP1O60381 514 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 TBX10O75333 385 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 ATG7O95352 703 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 KRT32Q14532 448 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 CLUL1Q15846 466 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 ALG13Q9NP73 1137 aaKnown RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 LRFN2Q9ULH4 789 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 GINS2Q9Y248 185 aa11.89□□□□□ -0.51
TVP23B-208ENST00000575261 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
TVP23B-208ENST00000575261 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 MBTPS2O43462 519 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 CCNE2O96020 404 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 NDUFV1P49821 464 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 SETQ01105 290 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 DLX2Q07687 328 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 ABHD15Q6UXT9 468 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 RTN4RL1Q86UN2 441 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
TVP23B-208ENST00000575261 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
TVP23B-208ENST00000575261 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms