RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 PCYT2Q99447 389 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 OSBPL7Q9BZF2 842 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 ZMYND12Q9H0C1 365 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 SLC28A3Q9HAS3 691 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 ERAP1Q9NZ08 941 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 PCDHA11Q9Y5I1 949 aa11.37□□□□□ -0.59
RPA1-206ENST00000573994 SPTBN5Q9NRC6 3674 aaKnown RBP11.37□□□□□ -0.59
RPA1-206ENST00000573994 NFASCO94856 1347 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 MEIS1O00470 390 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 LGR5O75473 907 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 CCNE2O96020 404 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 GNAT1P11488 350 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 SSRP1Q08945 709 aaKnown RBP11.36□□□□□ -0.59
RPA1-206ENST00000573994 ADGRE1Q14246 886 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 FAM117BQ6P1L5 589 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 SPRED2Q7Z698 418 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 AIFM3Q96NN9 605 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 GAS2L1Q99501 681 aaPredicted RBP11.36□□□□□ -0.59
RPA1-206ENST00000573994 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 AZI2Q9H6S1 392 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
RPA1-206ENST00000573994 NRCAMQ92823 1304 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 TET1Q8NFU7 2136 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 IGLV3-22A0A075B6J6 115 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 BACH1O14867 736 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 TLL1O43897 1013 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 IGFBP4P22692 258 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 GNA11P29992 359 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 NLRP5P59047 1200 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 ADAM17P78536 824 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 PRR16Q569H4 304 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.35□□□□□ -0.59
RPA1-206ENST00000573994 DBF4BQ8NFT6 615 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 BICD2Q8TD16 824 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 PPM1EQ8WY54 764 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 ZNF274Q96GC6 653 aaPredicted RBP11.35□□□□□ -0.59
RPA1-206ENST00000573994 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
RPA1-206ENST00000573994 SMARCAD1Q9H4L7 1026 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 TUBE1Q9UJT0 475 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 TPCN1Q9ULQ1 816 aa11.35□□□□□ -0.59
RPA1-206ENST00000573994 ABHD14A-ACY1A0A1B0GW23 586 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 EPOPA6NHQ4 379 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 RFXAPO00287 272 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 IPO5O00410 1097 aaKnown RBP11.34□□□□□ -0.59
RPA1-206ENST00000573994 HRO43593 1189 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 CAND2O75155 1236 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 CYP3A4P08684 503 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 GHRP10912 638 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
RPA1-206ENST00000573994 SCRN1Q12765 414 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 IKBKEQ14164 716 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 PLCB4Q15147 1175 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.34□□□□□ -0.59
RPA1-206ENST00000573994 NIPA1Q7RTP0 329 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 CCDC60Q8IWA6 550 aaPredicted RBP11.34□□□□□ -0.59
RPA1-206ENST00000573994 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 ARNTL2Q8WYA1 636 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 ZNF577Q9BSK1 485 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
RPA1-206ENST00000573994 MBLAC1A4D2B0 266 aaPredicted RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 KIF28PB7ZC32 967 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 DHX15O43143 795 aaKnown RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 DEXIO95424 95 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 INSRRP14616 1297 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 STAT5BP51692 787 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 AK2P54819 239 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 TAP1Q03518 808 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 TMEM62Q0P6H9 643 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 CCDC85BQ15834 202 aaPredicted RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 PLEKHG4Q58EX7 1191 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 TAF2Q6P1X5 1199 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 MYOCDQ8IZQ8 938 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 DNAJB3Q8WWF6 145 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 SEPT8Q92599 483 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 LENG9Q96B70 501 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
RPA1-206ENST00000573994 PRDM6Q9NQX0 595 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 TCEAL9Q9UHQ7 104 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 KCNJ14Q9UNX9 436 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 GBF1Q92538 1859 aa11.33□□□□□ -0.6
RPA1-206ENST00000573994 EDIL3O43854 480 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 PFKFB2O60825 505 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 EFCAB14O75071 495 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 CDKL5O76039 1030 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 GJB5O95377 273 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 LARGE1O95461 756 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 TDP2O95551 362 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 CHRNA1P02708 482 aa11.32□□□□□ -0.6
RPA1-206ENST00000573994 AMHP03971 560 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms